FELIX: a High-Throughput Network Approach for Interfacing to Front End Electronics for ATLAS Upgrades
J. Anderson, A. Borga, H. Boterenbrood, H. Chen, K. Chen, G. Drake, D. Francis, B. Gorini, F. Lanni, G. Lehmann Miotto, L. Levinson, J. Narevicius, C. Plessl, A. Roich, S. Ryu, F. Schreuder, J. Schumacher, W. Vandelli, J. Vermeulen, J. Zhang, Journal of Physics: Conference Series 664 (2015).

Seven Recipes for Setting Your FPGA on Fire – A Cookbook on Heat Generators
A. Agne, H. Hangmann, M. Happe, M. Platzner, C. Plessl, Microprocessors and Microsystems 38 (2014) 911–919.

Self-awareness as a Model for Designing and Operating Heterogeneous Multicores
A. Agne, M. Happe, A. Lösch, C. Plessl, M. Platzner, ACM Transactions on Reconfigurable Technology and Systems (TRETS) 7 (2014).

ReconOS - An Operating System Approach for Reconfigurable Computing
A. Agne, M. Happe, A. Keller, E. Lübbers, B. Plattner, M. Platzner, C. Plessl, IEEE Micro 34 (2014) 60–71.

Accelerating Finite Difference Time Domain Simulations with Reconfigurable Dataflow Computers
H. Giefers, C. Plessl, J. Förstner, ACM SIGARCH Computer Architecture News 41 (2014) 65–70.

Novel Field-Programmable Gate Array Architecture for Computing the Eigenvalue Decomposition of Para-Hermitian Polynomial Matrices
S. Kasap, S. Redif, IEEE Trans. on Very Large Scale Integration (VLSI) Systems 22 (2013) 522–536.

Cost-aware and SLO Fulfilling Software as a Service
O. Niehörster, J. Simon, A. Brinkmann, A. Keller, J. Krüger, Journal of Grid Computing 10 (2012) 553–577.

A Single Sign-On Infrastructure for Science Gateways on a Use Case for Structural Bioinformatics
S. Gesing, R. Grunzke, J. Krüger, G. Birkenheuer, M. Wewior, P. Schäfer, B. Schuller, J. Schuster, S. Herres-Pawlis, S. Breuers, Á. Balaskó, M. Kozlovszky, A. Szikszay Fabri, L. Packschies, P. Kacsuk, D. Blunk, T. Steinke, A. Brinkmann, G. Fels, R. Müller-Pfefferkorn, R. Jäkel, O. Kohlbacher, Journal of Grid Computing 10 (2012) 769–790.

STIR: Software for Tomographic Image Reconstruction Release 2
K. Thielemans, C. Tsoumpas, S. Mustafovic, T. Beisel, P. Aguiar, N. Dikaios, M. W Jacobson, Physics in Medicine and Biology 57 (2012) 867–883.

Parallel algorithm for computation of second-order sequential best rotations
S. Redif, S. Kasap, Int. Journal of Electronics 100 (2012) 1646–1651.

Parallel Processor Design and Implementation for Molecular Dynamics Simulations on a FPGA Parallel Computer
S. Kasap, K. Benkrid, Journal of Computers 7 (2012) 1312–1328.

Workflow-enhanced conformational analysis of guanidine zinc complexes via a science gateway
S. Herres-Pawlis, G. Birkenheuer, A. Brinkmann, S. Gesing, R. Grunzke, R. Jäkel, O. Kohlbacher, J. Krüger, I. Dos Santos Vieira, Studies in Health Technology and Informatics 175 (2012) 142–151.

IMORC: An Infrastructure and Architecture Template for Implementing High-Performance Reconfigurable FPGA Accelerators
T. Schumacher, C. Plessl, M. Platzner, Microprocessors and Microsystems 36 (2012) 110–126.

On the Feasibility and Limitations of Just-In-Time Instruction Set Extension for FPGA-based Reconfigurable Processors
M. Grad, C. Plessl, Int. Journal of Reconfigurable Computing (IJRC) (2012).

Virtualized HPC: a contradiction in terms?
G. Birkenheuer, A. Brinkmann, J. Kaiser, A. Keller, M. Keller, C. Kleineweber, C. Konersmann, O. Niehörster, T. Schäfer, J. Simon, M. Wilhelm, Software: Practice and Experience (2011).

Infrastructure Federation Through Virtualized Delegation of Resources and Services
G. Birkenheuer, A. Brinkmann, M. Högqvist, A. Papaspyrou, B. Schott, D. Sommerfeld, W. Ziegler, Journal of Grid Computing 9 (2011) 355–377.

FPGA Acceleration of Communication-bound Streaming Applications: Architecture Modeling and a 3D Image Compositing Case Study
T. Schumacher, T. Süß, C. Plessl, M. Platzner, Int. Journal of Recon- Figurable Computing (IJRC) (2011).

Risikomanagement für verteilte Umgebungen
A. Brinkmann, D. Battré, G. Birkenheuer, O. Kao, K. Voß, ForschungsForum Paderborn 13 (2010).

A Microdriver Architecture for Error Correcting Codes inside the Linux Kernel
A. Brinkmann, D. Eschweiler, Journal of Supercomputing (2009) 35:1-35:10.

Reformulating XPath queries and XSLT queries on XSLT views
S. Groppe, S. Böttcher, G. Birkenheuer, A. Höing, Data &; Knowledge Engineering 57 (2006) 64–110.