---
_id: '65545'
abstract:
- lang: eng
  text: "<jats:title>ABSTRACT</jats:title>\r\n                  <jats:p>Ligation of
    staple strands in DNA origami nanostructures (DONs) can yield enhanced structural
    stability in critical environments. This process can be viewed as performing hundreds
    of parallel reactions programmed on a self‐assembled nanoscale platform. While
    previous studies have focused on investigating the collective results of the chemical
    or enzymatic ligation reactions, herein, the global quantitative analysis of individual
    ligation reactions is achieved using quantitative PCR (qPCR). By mapping enzymatic
    ligation efficiency on a trapezoidal substructure representing one‐third of a
    triangular DON, ligation is shown to preferentially occur at the trapezoid edges
    rather than at inner sites. Excellent agreement between the experimental ligation
    yields and docking simulations suggests that this is a result of variations in
    the ligase docking probability. Ligation products involving more than two consecutive
    sequences can be generated with each enzyme‐catalyzed reaction as an independent
    event. Interestingly, the sharp contrast between the edges vs. the inner sites
    has been abolished by changing the reaction conditions and performing the ligation
    in a DMSO co‐solvent system. This analytic method provides unprecedented insight
    into the multiple ligation reactions occurring in parallel within complex DONs
    and will be an invaluable tool in the translation of DONs from the lab to real‐world
    applications.</jats:p>"
article_number: e08136
author:
- first_name: Konrad
  full_name: Hacker, Konrad
  last_name: Hacker
- first_name: Emilia
  full_name: Juricke, Emilia
  id: '68157'
  last_name: Juricke
- first_name: Carolin
  full_name: Münch, Carolin
  last_name: Münch
- first_name: Antonio
  full_name: Suma, Antonio
  last_name: Suma
- first_name: Adrian Clemens
  full_name: Keller, Adrian Clemens
  id: '48864'
  last_name: Keller
  orcid: 0000-0001-7139-3110
- first_name: Yixin
  full_name: Zhang, Yixin
  last_name: Zhang
citation:
  ama: Hacker K, Juricke E, Münch C, Suma A, Keller AC, Zhang Y. Global Quantitative
    Analysis of Ligation Reactions in Self‐Assembled DNA Nanostructures at the Single‐Nick
    Level. <i>Small</i>. Published online 2026. doi:<a href="https://doi.org/10.1002/smll.202508136">10.1002/smll.202508136</a>
  apa: Hacker, K., Juricke, E., Münch, C., Suma, A., Keller, A. C., &#38; Zhang, Y.
    (2026). Global Quantitative Analysis of Ligation Reactions in Self‐Assembled DNA
    Nanostructures at the Single‐Nick Level. <i>Small</i>, Article e08136. <a href="https://doi.org/10.1002/smll.202508136">https://doi.org/10.1002/smll.202508136</a>
  bibtex: '@article{Hacker_Juricke_Münch_Suma_Keller_Zhang_2026, title={Global Quantitative
    Analysis of Ligation Reactions in Self‐Assembled DNA Nanostructures at the Single‐Nick
    Level}, DOI={<a href="https://doi.org/10.1002/smll.202508136">10.1002/smll.202508136</a>},
    number={e08136}, journal={Small}, publisher={Wiley}, author={Hacker, Konrad and
    Juricke, Emilia and Münch, Carolin and Suma, Antonio and Keller, Adrian Clemens
    and Zhang, Yixin}, year={2026} }'
  chicago: Hacker, Konrad, Emilia Juricke, Carolin Münch, Antonio Suma, Adrian Clemens
    Keller, and Yixin Zhang. “Global Quantitative Analysis of Ligation Reactions in
    Self‐Assembled DNA Nanostructures at the Single‐Nick Level.” <i>Small</i>, 2026.
    <a href="https://doi.org/10.1002/smll.202508136">https://doi.org/10.1002/smll.202508136</a>.
  ieee: 'K. Hacker, E. Juricke, C. Münch, A. Suma, A. C. Keller, and Y. Zhang, “Global
    Quantitative Analysis of Ligation Reactions in Self‐Assembled DNA Nanostructures
    at the Single‐Nick Level,” <i>Small</i>, Art. no. e08136, 2026, doi: <a href="https://doi.org/10.1002/smll.202508136">10.1002/smll.202508136</a>.'
  mla: Hacker, Konrad, et al. “Global Quantitative Analysis of Ligation Reactions
    in Self‐Assembled DNA Nanostructures at the Single‐Nick Level.” <i>Small</i>,
    e08136, Wiley, 2026, doi:<a href="https://doi.org/10.1002/smll.202508136">10.1002/smll.202508136</a>.
  short: K. Hacker, E. Juricke, C. Münch, A. Suma, A.C. Keller, Y. Zhang, Small (2026).
date_created: 2026-05-02T10:20:10Z
date_updated: 2026-05-02T10:20:35Z
department:
- _id: '302'
doi: 10.1002/smll.202508136
language:
- iso: eng
publication: Small
publication_identifier:
  issn:
  - 1613-6810
  - 1613-6829
publication_status: published
publisher: Wiley
status: public
title: Global Quantitative Analysis of Ligation Reactions in Self‐Assembled DNA Nanostructures
  at the Single‐Nick Level
type: journal_article
user_id: '48864'
year: '2026'
...
---
_id: '54317'
abstract:
- lang: eng
  text: <jats:title>Abstract</jats:title><jats:p>Most properties of solid materials
    are defined by their internal electric field and charge density distributions
    which so far are difficult to measure with high spatial resolution. Especially
    for 2D materials, the atomic electric fields influence the optoelectronic properties.
    In this study, the atomic‐scale electric field and charge density distribution
    of WSe<jats:sub>2</jats:sub> bi‐ and trilayers are revealed using an emerging
    microscopy technique, differential phase contrast (DPC) imaging in scanning transmission
    electron microscopy (STEM). For pristine material, a higher positive charge density
    located at the selenium atomic columns compared to the tungsten atomic columns
    is obtained and tentatively explained by a coherent scattering effect. Furthermore,
    the change in the electric field distribution induced by a missing selenium atomic
    column is investigated. A characteristic electric field distribution in the vicinity
    of the defect with locally reduced magnitudes compared to the pristine lattice
    is observed. This effect is accompanied by a considerable inward relaxation of
    the surrounding lattice, which according to first principles DFT calculation is
    fully compatible with a missing column of Se atoms. This shows that DPC imaging,
    as an electric field sensitive technique, provides additional and remarkable information
    to the otherwise only structural analysis obtained with conventional STEM imaging.</jats:p>
author:
- first_name: Maja
  full_name: Groll, Maja
  last_name: Groll
- first_name: Julius
  full_name: Bürger, Julius
  last_name: Bürger
- first_name: Ioannis
  full_name: Caltzidis, Ioannis
  last_name: Caltzidis
- first_name: Klaus D.
  full_name: Jöns, Klaus D.
  last_name: Jöns
- first_name: Wolf Gero
  full_name: Schmidt, Wolf Gero
  last_name: Schmidt
- first_name: Uwe
  full_name: Gerstmann, Uwe
  last_name: Gerstmann
- first_name: Jörg K. N.
  full_name: Lindner, Jörg K. N.
  last_name: Lindner
citation:
  ama: Groll M, Bürger J, Caltzidis I, et al. DFT‐Assisted Investigation of the Electric
    Field and Charge Density Distribution of Pristine and Defective 2D WSe<sub>2</sub>
    by Differential Phase Contrast Imaging. <i>Small</i>. Published online 2024. doi:<a
    href="https://doi.org/10.1002/smll.202311635">10.1002/smll.202311635</a>
  apa: Groll, M., Bürger, J., Caltzidis, I., Jöns, K. D., Schmidt, W. G., Gerstmann,
    U., &#38; Lindner, J. K. N. (2024). DFT‐Assisted Investigation of the Electric
    Field and Charge Density Distribution of Pristine and Defective 2D WSe<sub>2</sub>
    by Differential Phase Contrast Imaging. <i>Small</i>. <a href="https://doi.org/10.1002/smll.202311635">https://doi.org/10.1002/smll.202311635</a>
  bibtex: '@article{Groll_Bürger_Caltzidis_Jöns_Schmidt_Gerstmann_Lindner_2024, title={DFT‐Assisted
    Investigation of the Electric Field and Charge Density Distribution of Pristine
    and Defective 2D WSe<sub>2</sub> by Differential Phase Contrast Imaging}, DOI={<a
    href="https://doi.org/10.1002/smll.202311635">10.1002/smll.202311635</a>}, journal={Small},
    publisher={Wiley}, author={Groll, Maja and Bürger, Julius and Caltzidis, Ioannis
    and Jöns, Klaus D. and Schmidt, Wolf Gero and Gerstmann, Uwe and Lindner, Jörg
    K. N.}, year={2024} }'
  chicago: Groll, Maja, Julius Bürger, Ioannis Caltzidis, Klaus D. Jöns, Wolf Gero
    Schmidt, Uwe Gerstmann, and Jörg K. N. Lindner. “DFT‐Assisted Investigation of
    the Electric Field and Charge Density Distribution of Pristine and Defective 2D
    WSe<sub>2</sub> by Differential Phase Contrast Imaging.” <i>Small</i>, 2024. <a
    href="https://doi.org/10.1002/smll.202311635">https://doi.org/10.1002/smll.202311635</a>.
  ieee: 'M. Groll <i>et al.</i>, “DFT‐Assisted Investigation of the Electric Field
    and Charge Density Distribution of Pristine and Defective 2D WSe<sub>2</sub> by
    Differential Phase Contrast Imaging,” <i>Small</i>, 2024, doi: <a href="https://doi.org/10.1002/smll.202311635">10.1002/smll.202311635</a>.'
  mla: Groll, Maja, et al. “DFT‐Assisted Investigation of the Electric Field and Charge
    Density Distribution of Pristine and Defective 2D WSe<sub>2</sub> by Differential
    Phase Contrast Imaging.” <i>Small</i>, Wiley, 2024, doi:<a href="https://doi.org/10.1002/smll.202311635">10.1002/smll.202311635</a>.
  short: M. Groll, J. Bürger, I. Caltzidis, K.D. Jöns, W.G. Schmidt, U. Gerstmann,
    J.K.N. Lindner, Small (2024).
date_created: 2024-05-17T09:14:49Z
date_updated: 2024-05-17T09:16:20Z
doi: 10.1002/smll.202311635
language:
- iso: eng
publication: Small
publication_identifier:
  issn:
  - 1613-6810
  - 1613-6829
publication_status: published
publisher: Wiley
status: public
title: DFT‐Assisted Investigation of the Electric Field and Charge Density Distribution
  of Pristine and Defective 2D WSe<sub>2</sub> by Differential Phase Contrast Imaging
type: journal_article
user_id: '46952'
year: '2024'
...
---
_id: '54147'
abstract:
- lang: eng
  text: <jats:title>Abstract</jats:title><jats:p>Most properties of solid materials
    are defined by their internal electric field and charge density distributions
    which so far are difficult to measure with high spatial resolution. Especially
    for 2D materials, the atomic electric fields influence the optoelectronic properties.
    In this study, the atomic‐scale electric field and charge density distribution
    of WSe<jats:sub>2</jats:sub> bi‐ and trilayers are revealed using an emerging
    microscopy technique, differential phase contrast (DPC) imaging in scanning transmission
    electron microscopy (STEM). For pristine material, a higher positive charge density
    located at the selenium atomic columns compared to the tungsten atomic columns
    is obtained and tentatively explained by a coherent scattering effect. Furthermore,
    the change in the electric field distribution induced by a missing selenium atomic
    column is investigated. A characteristic electric field distribution in the vicinity
    of the defect with locally reduced magnitudes compared to the pristine lattice
    is observed. This effect is accompanied by a considerable inward relaxation of
    the surrounding lattice, which according to first principles DFT calculation is
    fully compatible with a missing column of Se atoms. This shows that DPC imaging,
    as an electric field sensitive technique, provides additional and remarkable information
    to the otherwise only structural analysis obtained with conventional STEM imaging.</jats:p>
author:
- first_name: Maja
  full_name: Groll, Maja
  last_name: Groll
- first_name: Julius
  full_name: Bürger, Julius
  last_name: Bürger
- first_name: Ioannis
  full_name: Caltzidis, Ioannis
  last_name: Caltzidis
- first_name: Klaus D.
  full_name: Jöns, Klaus D.
  last_name: Jöns
- first_name: Wolf Gero
  full_name: Schmidt, Wolf Gero
  last_name: Schmidt
- first_name: Uwe
  full_name: Gerstmann, Uwe
  last_name: Gerstmann
- first_name: Jörg K. N.
  full_name: Lindner, Jörg K. N.
  last_name: Lindner
citation:
  ama: Groll M, Bürger J, Caltzidis I, et al. DFT‐Assisted Investigation of the Electric
    Field and Charge Density Distribution of Pristine and Defective 2D WSe<sub>2</sub>
    by Differential Phase Contrast Imaging. <i>Small</i>. Published online 2024. doi:<a
    href="https://doi.org/10.1002/smll.202311635">10.1002/smll.202311635</a>
  apa: Groll, M., Bürger, J., Caltzidis, I., Jöns, K. D., Schmidt, W. G., Gerstmann,
    U., &#38; Lindner, J. K. N. (2024). DFT‐Assisted Investigation of the Electric
    Field and Charge Density Distribution of Pristine and Defective 2D WSe<sub>2</sub>
    by Differential Phase Contrast Imaging. <i>Small</i>. <a href="https://doi.org/10.1002/smll.202311635">https://doi.org/10.1002/smll.202311635</a>
  bibtex: '@article{Groll_Bürger_Caltzidis_Jöns_Schmidt_Gerstmann_Lindner_2024, title={DFT‐Assisted
    Investigation of the Electric Field and Charge Density Distribution of Pristine
    and Defective 2D WSe<sub>2</sub> by Differential Phase Contrast Imaging}, DOI={<a
    href="https://doi.org/10.1002/smll.202311635">10.1002/smll.202311635</a>}, journal={Small},
    publisher={Wiley}, author={Groll, Maja and Bürger, Julius and Caltzidis, Ioannis
    and Jöns, Klaus D. and Schmidt, Wolf Gero and Gerstmann, Uwe and Lindner, Jörg
    K. N.}, year={2024} }'
  chicago: Groll, Maja, Julius Bürger, Ioannis Caltzidis, Klaus D. Jöns, Wolf Gero
    Schmidt, Uwe Gerstmann, and Jörg K. N. Lindner. “DFT‐Assisted Investigation of
    the Electric Field and Charge Density Distribution of Pristine and Defective 2D
    WSe<sub>2</sub> by Differential Phase Contrast Imaging.” <i>Small</i>, 2024. <a
    href="https://doi.org/10.1002/smll.202311635">https://doi.org/10.1002/smll.202311635</a>.
  ieee: 'M. Groll <i>et al.</i>, “DFT‐Assisted Investigation of the Electric Field
    and Charge Density Distribution of Pristine and Defective 2D WSe<sub>2</sub> by
    Differential Phase Contrast Imaging,” <i>Small</i>, 2024, doi: <a href="https://doi.org/10.1002/smll.202311635">10.1002/smll.202311635</a>.'
  mla: Groll, Maja, et al. “DFT‐Assisted Investigation of the Electric Field and Charge
    Density Distribution of Pristine and Defective 2D WSe<sub>2</sub> by Differential
    Phase Contrast Imaging.” <i>Small</i>, Wiley, 2024, doi:<a href="https://doi.org/10.1002/smll.202311635">10.1002/smll.202311635</a>.
  short: M. Groll, J. Bürger, I. Caltzidis, K.D. Jöns, W.G. Schmidt, U. Gerstmann,
    J.K.N. Lindner, Small (2024).
date_created: 2024-05-10T08:45:43Z
date_updated: 2025-01-22T09:06:46Z
department:
- _id: '286'
- _id: '15'
doi: 10.1002/smll.202311635
language:
- iso: eng
publication: Small
publication_identifier:
  issn:
  - 1613-6810
  - 1613-6829
publication_status: published
publisher: Wiley
status: public
title: DFT‐Assisted Investigation of the Electric Field and Charge Density Distribution
  of Pristine and Defective 2D WSe<sub>2</sub> by Differential Phase Contrast Imaging
type: journal_article
user_id: '77496'
year: '2024'
...
---
_id: '54868'
abstract:
- lang: eng
  text: <jats:title>Abstract</jats:title><jats:p>Most properties of solid materials
    are defined by their internal electric field and charge density distributions
    which so far are difficult to measure with high spatial resolution. Especially
    for 2D materials, the atomic electric fields influence the optoelectronic properties.
    In this study, the atomic‐scale electric field and charge density distribution
    of WSe<jats:sub>2</jats:sub> bi‐ and trilayers are revealed using an emerging
    microscopy technique, differential phase contrast (DPC) imaging in scanning transmission
    electron microscopy (STEM). For pristine material, a higher positive charge density
    located at the selenium atomic columns compared to the tungsten atomic columns
    is obtained and tentatively explained by a coherent scattering effect. Furthermore,
    the change in the electric field distribution induced by a missing selenium atomic
    column is investigated. A characteristic electric field distribution in the vicinity
    of the defect with locally reduced magnitudes compared to the pristine lattice
    is observed. This effect is accompanied by a considerable inward relaxation of
    the surrounding lattice, which according to first principles DFT calculation is
    fully compatible with a missing column of Se atoms. This shows that DPC imaging,
    as an electric field sensitive technique, provides additional and remarkable information
    to the otherwise only structural analysis obtained with conventional STEM imaging.</jats:p>
article_type: original
author:
- first_name: Maja
  full_name: Groll, Maja
  last_name: Groll
- first_name: Julius
  full_name: Bürger, Julius
  id: '46952'
  last_name: Bürger
- first_name: Ioannis
  full_name: Caltzidis, Ioannis
  id: '87911'
  last_name: Caltzidis
- first_name: Klaus D.
  full_name: Jöns, Klaus D.
  id: '85353'
  last_name: Jöns
- first_name: Wolf Gero
  full_name: Schmidt, Wolf Gero
  id: '468'
  last_name: Schmidt
  orcid: 0000-0002-2717-5076
- first_name: Uwe
  full_name: Gerstmann, Uwe
  id: '171'
  last_name: Gerstmann
  orcid: 0000-0002-4476-223X
- first_name: Jörg K. N.
  full_name: Lindner, Jörg K. N.
  id: '20797'
  last_name: Lindner
citation:
  ama: Groll M, Bürger J, Caltzidis I, et al. DFT‐Assisted Investigation of the Electric
    Field and Charge Density Distribution of Pristine and Defective 2D WSe<sub>2</sub>
    by Differential Phase Contrast Imaging. <i>Small</i>. Published online 2024. doi:<a
    href="https://doi.org/10.1002/smll.202311635">10.1002/smll.202311635</a>
  apa: Groll, M., Bürger, J., Caltzidis, I., Jöns, K. D., Schmidt, W. G., Gerstmann,
    U., &#38; Lindner, J. K. N. (2024). DFT‐Assisted Investigation of the Electric
    Field and Charge Density Distribution of Pristine and Defective 2D WSe<sub>2</sub>
    by Differential Phase Contrast Imaging. <i>Small</i>. <a href="https://doi.org/10.1002/smll.202311635">https://doi.org/10.1002/smll.202311635</a>
  bibtex: '@article{Groll_Bürger_Caltzidis_Jöns_Schmidt_Gerstmann_Lindner_2024, title={DFT‐Assisted
    Investigation of the Electric Field and Charge Density Distribution of Pristine
    and Defective 2D WSe<sub>2</sub> by Differential Phase Contrast Imaging}, DOI={<a
    href="https://doi.org/10.1002/smll.202311635">10.1002/smll.202311635</a>}, journal={Small},
    publisher={Wiley}, author={Groll, Maja and Bürger, Julius and Caltzidis, Ioannis
    and Jöns, Klaus D. and Schmidt, Wolf Gero and Gerstmann, Uwe and Lindner, Jörg
    K. N.}, year={2024} }'
  chicago: Groll, Maja, Julius Bürger, Ioannis Caltzidis, Klaus D. Jöns, Wolf Gero
    Schmidt, Uwe Gerstmann, and Jörg K. N. Lindner. “DFT‐Assisted Investigation of
    the Electric Field and Charge Density Distribution of Pristine and Defective 2D
    WSe<sub>2</sub> by Differential Phase Contrast Imaging.” <i>Small</i>, 2024. <a
    href="https://doi.org/10.1002/smll.202311635">https://doi.org/10.1002/smll.202311635</a>.
  ieee: 'M. Groll <i>et al.</i>, “DFT‐Assisted Investigation of the Electric Field
    and Charge Density Distribution of Pristine and Defective 2D WSe<sub>2</sub> by
    Differential Phase Contrast Imaging,” <i>Small</i>, 2024, doi: <a href="https://doi.org/10.1002/smll.202311635">10.1002/smll.202311635</a>.'
  mla: Groll, Maja, et al. “DFT‐Assisted Investigation of the Electric Field and Charge
    Density Distribution of Pristine and Defective 2D WSe<sub>2</sub> by Differential
    Phase Contrast Imaging.” <i>Small</i>, Wiley, 2024, doi:<a href="https://doi.org/10.1002/smll.202311635">10.1002/smll.202311635</a>.
  short: M. Groll, J. Bürger, I. Caltzidis, K.D. Jöns, W.G. Schmidt, U. Gerstmann,
    J.K.N. Lindner, Small (2024).
date_created: 2024-06-24T09:46:25Z
date_updated: 2025-12-05T13:39:01Z
department:
- _id: '15'
- _id: '170'
- _id: '295'
- _id: '790'
- _id: '642'
- _id: '286'
- _id: '429'
- _id: '230'
- _id: '27'
- _id: '35'
- _id: '169'
doi: 10.1002/smll.202311635
language:
- iso: eng
project:
- _id: '53'
  name: 'TRR 142: TRR 142 - Maßgeschneiderte nichtlineare Photonik: Von grundlegenden
    Konzepten zu funktionellen Strukturen'
- _id: '54'
  name: 'TRR 142 - A: TRR 142 - Project Area A'
- _id: '55'
  name: 'TRR 142 - B: TRR 142 - Project Area B'
- _id: '166'
  name: 'TRR 142 - A11: TRR 142 - Subproject A11'
- _id: '168'
  name: 'TRR 142 - B07: TRR 142 - Polaronen-Einfluss auf die optischen Eigenschaften
    von Lithiumniobat (B07*)'
- _id: '52'
  name: 'PC2: Computing Resources Provided by the Paderborn Center for Parallel Computing'
publication: Small
publication_identifier:
  issn:
  - 1613-6810
  - 1613-6829
publication_status: published
publisher: Wiley
status: public
title: DFT‐Assisted Investigation of the Electric Field and Charge Density Distribution
  of Pristine and Defective 2D WSe<sub>2</sub> by Differential Phase Contrast Imaging
type: journal_article
user_id: '16199'
year: '2024'
...
---
_id: '44504'
author:
- first_name: Veikko
  full_name: Linko, Veikko
  last_name: Linko
- first_name: Adrian
  full_name: Keller, Adrian
  id: '48864'
  last_name: Keller
  orcid: 0000-0001-7139-3110
citation:
  ama: 'Linko V, Keller A. Stability of DNA Origami Nanostructures in Physiological
    Media: The Role of Molecular Interactions. <i>Small</i>. Published online 2023.
    doi:<a href="https://doi.org/10.1002/smll.202301935">10.1002/smll.202301935</a>'
  apa: 'Linko, V., &#38; Keller, A. (2023). Stability of DNA Origami Nanostructures
    in Physiological Media: The Role of Molecular Interactions. <i>Small</i>. <a href="https://doi.org/10.1002/smll.202301935">https://doi.org/10.1002/smll.202301935</a>'
  bibtex: '@article{Linko_Keller_2023, title={Stability of DNA Origami Nanostructures
    in Physiological Media: The Role of Molecular Interactions}, DOI={<a href="https://doi.org/10.1002/smll.202301935">10.1002/smll.202301935</a>},
    journal={Small}, publisher={Wiley}, author={Linko, Veikko and Keller, Adrian},
    year={2023} }'
  chicago: 'Linko, Veikko, and Adrian Keller. “Stability of DNA Origami Nanostructures
    in Physiological Media: The Role of Molecular Interactions.” <i>Small</i>, 2023.
    <a href="https://doi.org/10.1002/smll.202301935">https://doi.org/10.1002/smll.202301935</a>.'
  ieee: 'V. Linko and A. Keller, “Stability of DNA Origami Nanostructures in Physiological
    Media: The Role of Molecular Interactions,” <i>Small</i>, 2023, doi: <a href="https://doi.org/10.1002/smll.202301935">10.1002/smll.202301935</a>.'
  mla: 'Linko, Veikko, and Adrian Keller. “Stability of DNA Origami Nanostructures
    in Physiological Media: The Role of Molecular Interactions.” <i>Small</i>, Wiley,
    2023, doi:<a href="https://doi.org/10.1002/smll.202301935">10.1002/smll.202301935</a>.'
  short: V. Linko, A. Keller, Small (2023).
date_created: 2023-05-05T10:49:01Z
date_updated: 2023-05-05T10:49:18Z
department:
- _id: '302'
doi: 10.1002/smll.202301935
keyword:
- Biomaterials
- Biotechnology
- General Materials Science
- General Chemistry
language:
- iso: eng
publication: Small
publication_identifier:
  issn:
  - 1613-6810
  - 1613-6829
publication_status: published
publisher: Wiley
status: public
title: 'Stability of DNA Origami Nanostructures in Physiological Media: The Role of
  Molecular Interactions'
type: journal_article
user_id: '48864'
year: '2023'
...
---
_id: '30738'
author:
- first_name: Yang
  full_name: Xin, Yang
  last_name: Xin
- first_name: Petteri
  full_name: Piskunen, Petteri
  last_name: Piskunen
- first_name: Antonio
  full_name: Suma, Antonio
  last_name: Suma
- first_name: Changyong
  full_name: Li, Changyong
  last_name: Li
- first_name: Heini
  full_name: Ijäs, Heini
  last_name: Ijäs
- first_name: Sofia
  full_name: Ojasalo, Sofia
  last_name: Ojasalo
- first_name: Iris
  full_name: Seitz, Iris
  last_name: Seitz
- first_name: Mauri A.
  full_name: Kostiainen, Mauri A.
  last_name: Kostiainen
- first_name: Guido
  full_name: Grundmeier, Guido
  id: '194'
  last_name: Grundmeier
- first_name: Veikko
  full_name: Linko, Veikko
  last_name: Linko
- first_name: Adrian
  full_name: Keller, Adrian
  id: '48864'
  last_name: Keller
  orcid: 0000-0001-7139-3110
citation:
  ama: Xin Y, Piskunen P, Suma A, et al. Environment‐Dependent Stability and Mechanical
    Properties of DNA Origami Six‐Helix Bundles with Different Crossover Spacings.
    <i>Small</i>. 2022;18:2107393. doi:<a href="https://doi.org/10.1002/smll.202107393">10.1002/smll.202107393</a>
  apa: Xin, Y., Piskunen, P., Suma, A., Li, C., Ijäs, H., Ojasalo, S., Seitz, I.,
    Kostiainen, M. A., Grundmeier, G., Linko, V., &#38; Keller, A. (2022). Environment‐Dependent
    Stability and Mechanical Properties of DNA Origami Six‐Helix Bundles with Different
    Crossover Spacings. <i>Small</i>, <i>18</i>, 2107393. <a href="https://doi.org/10.1002/smll.202107393">https://doi.org/10.1002/smll.202107393</a>
  bibtex: '@article{Xin_Piskunen_Suma_Li_Ijäs_Ojasalo_Seitz_Kostiainen_Grundmeier_Linko_et
    al._2022, title={Environment‐Dependent Stability and Mechanical Properties of
    DNA Origami Six‐Helix Bundles with Different Crossover Spacings}, volume={18},
    DOI={<a href="https://doi.org/10.1002/smll.202107393">10.1002/smll.202107393</a>},
    journal={Small}, publisher={Wiley}, author={Xin, Yang and Piskunen, Petteri and
    Suma, Antonio and Li, Changyong and Ijäs, Heini and Ojasalo, Sofia and Seitz,
    Iris and Kostiainen, Mauri A. and Grundmeier, Guido and Linko, Veikko and et al.},
    year={2022}, pages={2107393} }'
  chicago: 'Xin, Yang, Petteri Piskunen, Antonio Suma, Changyong Li, Heini Ijäs, Sofia
    Ojasalo, Iris Seitz, et al. “Environment‐Dependent Stability and Mechanical Properties
    of DNA Origami Six‐Helix Bundles with Different Crossover Spacings.” <i>Small</i>
    18 (2022): 2107393. <a href="https://doi.org/10.1002/smll.202107393">https://doi.org/10.1002/smll.202107393</a>.'
  ieee: 'Y. Xin <i>et al.</i>, “Environment‐Dependent Stability and Mechanical Properties
    of DNA Origami Six‐Helix Bundles with Different Crossover Spacings,” <i>Small</i>,
    vol. 18, p. 2107393, 2022, doi: <a href="https://doi.org/10.1002/smll.202107393">10.1002/smll.202107393</a>.'
  mla: Xin, Yang, et al. “Environment‐Dependent Stability and Mechanical Properties
    of DNA Origami Six‐Helix Bundles with Different Crossover Spacings.” <i>Small</i>,
    vol. 18, Wiley, 2022, p. 2107393, doi:<a href="https://doi.org/10.1002/smll.202107393">10.1002/smll.202107393</a>.
  short: Y. Xin, P. Piskunen, A. Suma, C. Li, H. Ijäs, S. Ojasalo, I. Seitz, M.A.
    Kostiainen, G. Grundmeier, V. Linko, A. Keller, Small 18 (2022) 2107393.
date_created: 2022-04-04T14:23:56Z
date_updated: 2022-05-05T11:04:15Z
department:
- _id: '302'
doi: 10.1002/smll.202107393
intvolume: '        18'
keyword:
- Biomaterials
- Biotechnology
- General Materials Science
- General Chemistry
language:
- iso: eng
page: '2107393'
publication: Small
publication_identifier:
  issn:
  - 1613-6810
  - 1613-6829
publication_status: published
publisher: Wiley
status: public
title: Environment‐Dependent Stability and Mechanical Properties of DNA Origami Six‐Helix
  Bundles with Different Crossover Spacings
type: journal_article
user_id: '48864'
volume: 18
year: '2022'
...
---
_id: '22649'
author:
- first_name: Yang
  full_name: Xin, Yang
  last_name: Xin
- first_name: Charlotte
  full_name: Kielar, Charlotte
  last_name: Kielar
- first_name: Siqi
  full_name: Zhu, Siqi
  last_name: Zhu
- first_name: Christoph
  full_name: Sikeler, Christoph
  last_name: Sikeler
- first_name: Xiaodan
  full_name: Xu, Xiaodan
  last_name: Xu
- first_name: Christin
  full_name: Möser, Christin
  last_name: Möser
- first_name: Guido
  full_name: Grundmeier, Guido
  id: '194'
  last_name: Grundmeier
- first_name: Tim
  full_name: Liedl, Tim
  last_name: Liedl
- first_name: Amelie
  full_name: Heuer‐Jungemann, Amelie
  last_name: Heuer‐Jungemann
- first_name: David M.
  full_name: Smith, David M.
  last_name: Smith
- first_name: Adrian
  full_name: Keller, Adrian
  id: '48864'
  last_name: Keller
  orcid: 0000-0001-7139-3110
citation:
  ama: Xin Y, Kielar C, Zhu S, et al. Cryopreservation of DNA Origami Nanostructures.
    <i>Small</i>. 2020;16:1905959. doi:<a href="https://doi.org/10.1002/smll.201905959">10.1002/smll.201905959</a>
  apa: Xin, Y., Kielar, C., Zhu, S., Sikeler, C., Xu, X., Möser, C., … Keller, A.
    (2020). Cryopreservation of DNA Origami Nanostructures. <i>Small</i>, <i>16</i>,
    1905959. <a href="https://doi.org/10.1002/smll.201905959">https://doi.org/10.1002/smll.201905959</a>
  bibtex: '@article{Xin_Kielar_Zhu_Sikeler_Xu_Möser_Grundmeier_Liedl_Heuer‐Jungemann_Smith_et
    al._2020, title={Cryopreservation of DNA Origami Nanostructures}, volume={16},
    DOI={<a href="https://doi.org/10.1002/smll.201905959">10.1002/smll.201905959</a>},
    journal={Small}, author={Xin, Yang and Kielar, Charlotte and Zhu, Siqi and Sikeler,
    Christoph and Xu, Xiaodan and Möser, Christin and Grundmeier, Guido and Liedl,
    Tim and Heuer‐Jungemann, Amelie and Smith, David M. and et al.}, year={2020},
    pages={1905959} }'
  chicago: 'Xin, Yang, Charlotte Kielar, Siqi Zhu, Christoph Sikeler, Xiaodan Xu,
    Christin Möser, Guido Grundmeier, et al. “Cryopreservation of DNA Origami Nanostructures.”
    <i>Small</i> 16 (2020): 1905959. <a href="https://doi.org/10.1002/smll.201905959">https://doi.org/10.1002/smll.201905959</a>.'
  ieee: Y. Xin <i>et al.</i>, “Cryopreservation of DNA Origami Nanostructures,” <i>Small</i>,
    vol. 16, p. 1905959, 2020.
  mla: Xin, Yang, et al. “Cryopreservation of DNA Origami Nanostructures.” <i>Small</i>,
    vol. 16, 2020, p. 1905959, doi:<a href="https://doi.org/10.1002/smll.201905959">10.1002/smll.201905959</a>.
  short: Y. Xin, C. Kielar, S. Zhu, C. Sikeler, X. Xu, C. Möser, G. Grundmeier, T.
    Liedl, A. Heuer‐Jungemann, D.M. Smith, A. Keller, Small 16 (2020) 1905959.
date_created: 2021-07-08T12:04:31Z
date_updated: 2022-01-06T06:55:38Z
department:
- _id: '302'
doi: 10.1002/smll.201905959
intvolume: '        16'
language:
- iso: eng
page: '1905959'
publication: Small
publication_identifier:
  issn:
  - 1613-6810
  - 1613-6829
publication_status: published
status: public
title: Cryopreservation of DNA Origami Nanostructures
type: journal_article
user_id: '48864'
volume: 16
year: '2020'
...
---
_id: '47956'
abstract:
- lang: eng
  text: Optically nonlinear Pb2B5O9X (X = Cl, Br) borate halides are an important
    group of materials for second harmonic generation (SHG). Additionally, they also
    possess excellent photocatalytic activity and stability in the process of dechlorination
    of chlorophenols, which are typical persistent organic pollutants. It would be
    of great interest to conduct in situ (photo‐) catalysis investigations during
    the whole photocatalytic process by SHG when considering them as photocatalytic
    materials. In order to get superior photocatalytic efficiency and maximum surface
    information, small particles are highly desired. Here, a low‐cost and fast synthesis
    route that allows growing microcrystalline optically nonlinear Pb<jats:sub>2</jats:sub>B<jats:sub>5</jats:sub>O<jats:sub>9</jats:sub>X
    borate halides at large quantities is introduced. When applying the ionothermal
    growth process at temperatures between 130 and 170 °C, microcrystallites with
    an average size of about 1 µm precipitate with an orthorhombic hilgardite‐like
    borate halide structure. Thorough examinations using powder X‐ray diffraction
    and scanning electron microscopy, the Pb2B5O9X microcrystals are indicated to
    be chemically pure and single‐phased. Besides, the Pb2B5O9X borate halides' SHG
    efficiencies are confirmed using confocal SHG microscopy. The low‐temperature
    synthesis route thus makes these borate halides a highly desirable material for
    surface studies such as monitoring chemical reactions with picosecond time resolution
    and in situ (photo‐) catalysis investigations.</jats:p>
article_number: '2000857'
article_type: original
author:
- first_name: Deming
  full_name: Tan, Deming
  last_name: Tan
- first_name: Benjamin
  full_name: Kirbus, Benjamin
  last_name: Kirbus
- first_name: Michael
  full_name: Rüsing, Michael
  id: '22501'
  last_name: Rüsing
  orcid: 0000-0003-4682-4577
- first_name: Tobias
  full_name: Pietsch, Tobias
  last_name: Pietsch
- first_name: Michael
  full_name: Ruck, Michael
  last_name: Ruck
- first_name: Lukas M.
  full_name: Eng, Lukas M.
  last_name: Eng
citation:
  ama: Tan D, Kirbus B, Rüsing M, Pietsch T, Ruck M, Eng LM. Resource‐Efficient Low‐Temperature
    Synthesis of Microcrystalline Pb2B5O9X (X = Cl, Br) for Surfaces Studies by Optical
    Second Harmonic Generation. <i>Small</i>. 2020;16(23). doi:<a href="https://doi.org/10.1002/smll.202000857">10.1002/smll.202000857</a>
  apa: Tan, D., Kirbus, B., Rüsing, M., Pietsch, T., Ruck, M., &#38; Eng, L. M. (2020).
    Resource‐Efficient Low‐Temperature Synthesis of Microcrystalline Pb2B5O9X (X =
    Cl, Br) for Surfaces Studies by Optical Second Harmonic Generation. <i>Small</i>,
    <i>16</i>(23), Article 2000857. <a href="https://doi.org/10.1002/smll.202000857">https://doi.org/10.1002/smll.202000857</a>
  bibtex: '@article{Tan_Kirbus_Rüsing_Pietsch_Ruck_Eng_2020, title={Resource‐Efficient
    Low‐Temperature Synthesis of Microcrystalline Pb2B5O9X (X = Cl, Br) for Surfaces
    Studies by Optical Second Harmonic Generation}, volume={16}, DOI={<a href="https://doi.org/10.1002/smll.202000857">10.1002/smll.202000857</a>},
    number={232000857}, journal={Small}, publisher={Wiley}, author={Tan, Deming and
    Kirbus, Benjamin and Rüsing, Michael and Pietsch, Tobias and Ruck, Michael and
    Eng, Lukas M.}, year={2020} }'
  chicago: Tan, Deming, Benjamin Kirbus, Michael Rüsing, Tobias Pietsch, Michael Ruck,
    and Lukas M. Eng. “Resource‐Efficient Low‐Temperature Synthesis of Microcrystalline
    Pb2B5O9X (X = Cl, Br) for Surfaces Studies by Optical Second Harmonic Generation.”
    <i>Small</i> 16, no. 23 (2020). <a href="https://doi.org/10.1002/smll.202000857">https://doi.org/10.1002/smll.202000857</a>.
  ieee: 'D. Tan, B. Kirbus, M. Rüsing, T. Pietsch, M. Ruck, and L. M. Eng, “Resource‐Efficient
    Low‐Temperature Synthesis of Microcrystalline Pb2B5O9X (X = Cl, Br) for Surfaces
    Studies by Optical Second Harmonic Generation,” <i>Small</i>, vol. 16, no. 23,
    Art. no. 2000857, 2020, doi: <a href="https://doi.org/10.1002/smll.202000857">10.1002/smll.202000857</a>.'
  mla: Tan, Deming, et al. “Resource‐Efficient Low‐Temperature Synthesis of Microcrystalline
    Pb2B5O9X (X = Cl, Br) for Surfaces Studies by Optical Second Harmonic Generation.”
    <i>Small</i>, vol. 16, no. 23, 2000857, Wiley, 2020, doi:<a href="https://doi.org/10.1002/smll.202000857">10.1002/smll.202000857</a>.
  short: D. Tan, B. Kirbus, M. Rüsing, T. Pietsch, M. Ruck, L.M. Eng, Small 16 (2020).
date_created: 2023-10-11T08:07:50Z
date_updated: 2023-10-11T08:09:29Z
doi: 10.1002/smll.202000857
intvolume: '        16'
issue: '23'
keyword:
- Biomaterials
- Biotechnology
- General Materials Science
- General Chemistry
language:
- iso: eng
publication: Small
publication_identifier:
  issn:
  - 1613-6810
  - 1613-6829
publication_status: published
publisher: Wiley
quality_controlled: '1'
status: public
title: Resource‐Efficient Low‐Temperature Synthesis of Microcrystalline Pb2B5O9X (X
  = Cl, Br) for Surfaces Studies by Optical Second Harmonic Generation
type: journal_article
user_id: '22501'
volume: 16
year: '2020'
...
---
_id: '22668'
author:
- first_name: Saminathan
  full_name: Ramakrishnan, Saminathan
  last_name: Ramakrishnan
- first_name: Georg
  full_name: Krainer, Georg
  last_name: Krainer
- first_name: Guido
  full_name: Grundmeier, Guido
  id: '194'
  last_name: Grundmeier
- first_name: Michael
  full_name: Schlierf, Michael
  last_name: Schlierf
- first_name: Adrian
  full_name: Keller, Adrian
  id: '48864'
  last_name: Keller
  orcid: 0000-0001-7139-3110
citation:
  ama: Ramakrishnan S, Krainer G, Grundmeier G, Schlierf M, Keller A. Cation-Induced
    Stabilization and Denaturation of DNA Origami Nanostructures in Urea and Guanidinium
    Chloride. <i>Small</i>. 2017;13:1702100. doi:<a href="https://doi.org/10.1002/smll.201702100">10.1002/smll.201702100</a>
  apa: Ramakrishnan, S., Krainer, G., Grundmeier, G., Schlierf, M., &#38; Keller,
    A. (2017). Cation-Induced Stabilization and Denaturation of DNA Origami Nanostructures
    in Urea and Guanidinium Chloride. <i>Small</i>, <i>13</i>, 1702100. <a href="https://doi.org/10.1002/smll.201702100">https://doi.org/10.1002/smll.201702100</a>
  bibtex: '@article{Ramakrishnan_Krainer_Grundmeier_Schlierf_Keller_2017, title={Cation-Induced
    Stabilization and Denaturation of DNA Origami Nanostructures in Urea and Guanidinium
    Chloride}, volume={13}, DOI={<a href="https://doi.org/10.1002/smll.201702100">10.1002/smll.201702100</a>},
    journal={Small}, author={Ramakrishnan, Saminathan and Krainer, Georg and Grundmeier,
    Guido and Schlierf, Michael and Keller, Adrian}, year={2017}, pages={1702100}
    }'
  chicago: 'Ramakrishnan, Saminathan, Georg Krainer, Guido Grundmeier, Michael Schlierf,
    and Adrian Keller. “Cation-Induced Stabilization and Denaturation of DNA Origami
    Nanostructures in Urea and Guanidinium Chloride.” <i>Small</i> 13 (2017): 1702100.
    <a href="https://doi.org/10.1002/smll.201702100">https://doi.org/10.1002/smll.201702100</a>.'
  ieee: S. Ramakrishnan, G. Krainer, G. Grundmeier, M. Schlierf, and A. Keller, “Cation-Induced
    Stabilization and Denaturation of DNA Origami Nanostructures in Urea and Guanidinium
    Chloride,” <i>Small</i>, vol. 13, p. 1702100, 2017.
  mla: Ramakrishnan, Saminathan, et al. “Cation-Induced Stabilization and Denaturation
    of DNA Origami Nanostructures in Urea and Guanidinium Chloride.” <i>Small</i>,
    vol. 13, 2017, p. 1702100, doi:<a href="https://doi.org/10.1002/smll.201702100">10.1002/smll.201702100</a>.
  short: S. Ramakrishnan, G. Krainer, G. Grundmeier, M. Schlierf, A. Keller, Small
    13 (2017) 1702100.
date_created: 2021-07-08T12:38:10Z
date_updated: 2022-01-06T06:55:38Z
department:
- _id: '302'
doi: 10.1002/smll.201702100
intvolume: '        13'
language:
- iso: eng
page: '1702100'
publication: Small
publication_identifier:
  issn:
  - 1613-6810
publication_status: published
status: public
title: Cation-Induced Stabilization and Denaturation of DNA Origami Nanostructures
  in Urea and Guanidinium Chloride
type: journal_article
user_id: '48864'
volume: 13
year: '2017'
...
---
_id: '39685'
author:
- first_name: Kevin
  full_name: Martens, Kevin
  last_name: Martens
- first_name: Timon
  full_name: Funck, Timon
  last_name: Funck
- first_name: Susanne
  full_name: Kempter, Susanne
  last_name: Kempter
- first_name: Eva-Maria
  full_name: Roller, Eva-Maria
  last_name: Roller
- first_name: Tim
  full_name: Liedl, Tim
  last_name: Liedl
- first_name: Benno M.
  full_name: Blaschke, Benno M.
  last_name: Blaschke
- first_name: Peter
  full_name: Knecht, Peter
  last_name: Knecht
- first_name: José Antonio
  full_name: Garrido, José Antonio
  last_name: Garrido
- first_name: Bingru
  full_name: Zhang, Bingru
  last_name: Zhang
- first_name: Heinz-Siegfried
  full_name: Kitzerow, Heinz-Siegfried
  id: '254'
  last_name: Kitzerow
citation:
  ama: Martens K, Funck T, Kempter S, et al. Alignment and Graphene-Assisted Decoration
    of Lyotropic Chromonic Liquid Crystals Containing DNA Origami Nanostructures.
    <i>Small</i>. 2016;12(12):1658-1666. doi:<a href="https://doi.org/10.1002/smll.201503382">10.1002/smll.201503382</a>
  apa: Martens, K., Funck, T., Kempter, S., Roller, E.-M., Liedl, T., Blaschke, B.
    M., Knecht, P., Garrido, J. A., Zhang, B., &#38; Kitzerow, H.-S. (2016). Alignment
    and Graphene-Assisted Decoration of Lyotropic Chromonic Liquid Crystals Containing
    DNA Origami Nanostructures. <i>Small</i>, <i>12</i>(12), 1658–1666. <a href="https://doi.org/10.1002/smll.201503382">https://doi.org/10.1002/smll.201503382</a>
  bibtex: '@article{Martens_Funck_Kempter_Roller_Liedl_Blaschke_Knecht_Garrido_Zhang_Kitzerow_2016,
    title={Alignment and Graphene-Assisted Decoration of Lyotropic Chromonic Liquid
    Crystals Containing DNA Origami Nanostructures}, volume={12}, DOI={<a href="https://doi.org/10.1002/smll.201503382">10.1002/smll.201503382</a>},
    number={12}, journal={Small}, publisher={Wiley}, author={Martens, Kevin and Funck,
    Timon and Kempter, Susanne and Roller, Eva-Maria and Liedl, Tim and Blaschke,
    Benno M. and Knecht, Peter and Garrido, José Antonio and Zhang, Bingru and Kitzerow,
    Heinz-Siegfried}, year={2016}, pages={1658–1666} }'
  chicago: 'Martens, Kevin, Timon Funck, Susanne Kempter, Eva-Maria Roller, Tim Liedl,
    Benno M. Blaschke, Peter Knecht, José Antonio Garrido, Bingru Zhang, and Heinz-Siegfried
    Kitzerow. “Alignment and Graphene-Assisted Decoration of Lyotropic Chromonic Liquid
    Crystals Containing DNA Origami Nanostructures.” <i>Small</i> 12, no. 12 (2016):
    1658–66. <a href="https://doi.org/10.1002/smll.201503382">https://doi.org/10.1002/smll.201503382</a>.'
  ieee: 'K. Martens <i>et al.</i>, “Alignment and Graphene-Assisted Decoration of
    Lyotropic Chromonic Liquid Crystals Containing DNA Origami Nanostructures,” <i>Small</i>,
    vol. 12, no. 12, pp. 1658–1666, 2016, doi: <a href="https://doi.org/10.1002/smll.201503382">10.1002/smll.201503382</a>.'
  mla: Martens, Kevin, et al. “Alignment and Graphene-Assisted Decoration of Lyotropic
    Chromonic Liquid Crystals Containing DNA Origami Nanostructures.” <i>Small</i>,
    vol. 12, no. 12, Wiley, 2016, pp. 1658–66, doi:<a href="https://doi.org/10.1002/smll.201503382">10.1002/smll.201503382</a>.
  short: K. Martens, T. Funck, S. Kempter, E.-M. Roller, T. Liedl, B.M. Blaschke,
    P. Knecht, J.A. Garrido, B. Zhang, H.-S. Kitzerow, Small 12 (2016) 1658–1666.
date_created: 2023-01-24T18:09:03Z
date_updated: 2023-01-24T18:09:38Z
department:
- _id: '313'
- _id: '230'
- _id: '638'
doi: 10.1002/smll.201503382
intvolume: '        12'
issue: '12'
keyword:
- Biomaterials
- Biotechnology
- General Materials Science
- General Chemistry
language:
- iso: eng
page: 1658-1666
publication: Small
publication_identifier:
  issn:
  - 1613-6810
publication_status: published
publisher: Wiley
status: public
title: Alignment and Graphene-Assisted Decoration of Lyotropic Chromonic Liquid Crystals
  Containing DNA Origami Nanostructures
type: journal_article
user_id: '254'
volume: 12
year: '2016'
...
