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63 Publications


2024 | Journal Article | LibreCat-ID: 53474
Lass, M., Kenter, T., Plessl, C., & Brehm, M. (2024). Characterizing Microheterogeneity in Liquid Mixtures via Local Density Fluctuations. Entropy, 26(4), Article 322. https://doi.org/10.3390/e26040322
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2023 | Journal Article | LibreCat-ID: 45361 | OA
Schade, R., Kenter, T., Elgabarty, H., Lass, M., Kühne, T., & Plessl, C. (2023). Breaking the exascale barrier for the electronic structure problem in ab-initio molecular dynamics. The International Journal of High Performance Computing Applications, Article 109434202311776. https://doi.org/10.1177/10943420231177631
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2023 | Journal Article | LibreCat-ID: 38041 | OA
Meyer, M., Kenter, T., & Plessl, C. (2023). Multi-FPGA Designs and Scaling of HPC Challenge Benchmarks via MPI and Circuit-Switched Inter-FPGA Networks. ACM Transactions on Reconfigurable Technology and Systems. https://doi.org/10.1145/3576200
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2023 | Journal Article | LibreCat-ID: 46120
Mazur, L., Bollweg, D., Clarke, D. A., Altenkort, L., Kaczmarek, O., Larsen, R., Shu, H.-T., Goswami, J., Scior, P., Sandmeyer, H., Neumann, M., Dick, H., Ali, S., Kim, J., Schmidt, C., Petreczky, P., & Mukherjee, S. (2023). SIMULATeQCD: A simple multi-GPU lattice code for QCD calculations. Computer Physics Communications. https://doi.org/10.48550/ARXIV.2306.01098
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2023 | Journal Article | LibreCat-ID: 46119
Altenkort, L., Eller, A. M., Francis, A., Kaczmarek, O., Mazur, L., Moore, G. D., & Shu, H.-T. (2023). Viscosity of pure-glue QCD from the lattice. Physical Review D, 108(1), Article 014503. https://doi.org/10.1103/physrevd.108.014503
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2022 | Journal Article | LibreCat-ID: 32234
Wojciechowski, M. (2022). Dataset for random uniform distributions of 2D circles and 3D spheres. Data Brief, 43, 108318.
LibreCat | PubMed | Europe PMC
 

2022 | Journal Article | LibreCat-ID: 27364
Meyer, M., Kenter, T., & Plessl, C. (2022). In-depth FPGA Accelerator Performance Evaluation with Single Node Benchmarks from the HPC Challenge Benchmark Suite for Intel and Xilinx FPGAs using OpenCL. Journal of Parallel and Distributed Computing. https://doi.org/10.1016/j.jpdc.2021.10.007
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2022 | Journal Article | LibreCat-ID: 46121
Altenkort, L., Eller, A. M., Kaczmarek, O., Mazur, L., Moore, G. D., & Shu, H.-T. (2022). Lattice QCD noise reduction for bosonic correlators through blocking. Physical Review D, 105(9), Article 094505. https://doi.org/10.1103/physrevd.105.094505
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2022 | Journal Article | LibreCat-ID: 32183
Hou, W., Yao, Y., Li, Y., Peng, B., Shi, K., Zhou, Z., Pan, J., Liu, M., & Hu, J. (2022). Linearly shifting ferromagnetic resonance response of La0.7Sr0.3MnO3 thin film for body temperature sensors. Frontiers of Materials Science, 16(1).
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2022 | Journal Article | LibreCat-ID: 40523
Jonas, B., Heinze, D. F., Schöll, E., Kallert, P., Langer, T., Krehs, S., Widhalm, A., Jöns, K., Reuter, D., Schumacher, S., & Zrenner, A. (2022). Nonlinear down-conversion in a single quantum dot. Nature Communications, 13(1), Article 1387. https://doi.org/10.1038/s41467-022-28993-3
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2022 | Journal Article | LibreCat-ID: 33226 | OA
Schade, R., Bauer, C., Tamoev, K., Mazur, L., Plessl, C., & Kühne, T. (2022). Parallel quantum chemistry on noisy intermediate-scale quantum computers. Phys. Rev. Research, 4, 033160. https://doi.org/10.1103/PhysRevResearch.4.033160
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2022 | Journal Article | LibreCat-ID: 50149
Lesch, E., Schilling, M. T., Brenner, S., Yang, Y., Gruss, O. J., Knoop, V., & Schallenberg-Rüdinger, M. (2022). Plant mitochondrial RNA editing factors can perform targeted C-to-U editing of nuclear transcripts in human cells. Nucleic Acids Research, 50(17), 9966–9983. https://doi.org/10.1093/nar/gkac752
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2022 | Journal Article | LibreCat-ID: 50146
Moroder, M., Grundner, M., Damanet, F., Schollwöck, U., Mardazad, S., Flannigan, S., Köhler, T., & Paeckel, S. (2022). Stable bipolarons in open quantum systems. Physical Review B 107, 214310 (2023). https://doi.org/10.1103/PhysRevB.107.214310
LibreCat | DOI | arXiv
 

2022 | Journal Article | LibreCat-ID: 50148
Borghini, N., Borrell, M., Feld, N., Roch, H., Schlichting, S., & Werthmann, C. (2022). Statistical analysis of initial state and final state response in  heavy-ion collisions. Phys. Rev. C 107 (2023) 034905. https://doi.org/10.1103/PhysRevC.107.034905
LibreCat | DOI | arXiv
 

2022 | Journal Article | LibreCat-ID: 33684 | OA
Schade, R., Kenter, T., Elgabarty, H., Lass, M., Schütt, O., Lazzaro, A., Pabst, H., Mohr, S., Hutter, J., Kühne, T., & Plessl, C. (2022). Towards electronic structure-based ab-initio molecular dynamics simulations with hundreds of millions of atoms. Parallel Computing, 111, Article 102920. https://doi.org/10.1016/j.parco.2022.102920
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2021 | Journal Article | LibreCat-ID: 32240
Chatwell, R. S., Guevara-Carrion, G., Gaponenko, Y., Shevtsova, V., & Vrabec, J. (2021). Diffusion of the carbon dioxide–ethanol mixture in the extended critical region. Physical Chemistry Chemical Physics, 23(4), 3106–3115. https://doi.org/10.1039/d0cp04985a
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2021 | Journal Article | LibreCat-ID: 46122
Kaczmarek, O., Mazur, L., & Sharma, S. (2021). Eigenvalue spectra of QCD and the fate of <mml:math xmlns:mml="http://www.w3.org/1998/Math/MathML" display="inline"><mml:msub><mml:mi>U</mml:mi><mml:mi>A</mml:mi></mml:msub><mml:mo stretchy="false">(</mml:mo><mml:mn>1</mml:mn><mml:mo stretchy="false">)</mml:mo></mml:math> breaking towards the chiral limit. Physical Review D, 104(9), Article 094518. https://doi.org/10.1103/physrevd.104.094518
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2021 | Journal Article | LibreCat-ID: 46124
Altenkort, L., Eller, A. M., Kaczmarek, O., Mazur, L., Moore, G. D., & Shu, H.-T. (2021). Heavy quark momentum diffusion from the lattice using gradient flow. Physical Review D, 103(1), Article 014511. https://doi.org/10.1103/physrevd.103.014511
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2021 | Journal Article | LibreCat-ID: 32243
Dabelow, L., Bo, S., & Eichhorn, R. (2021). How irreversible are steady-state trajectories of a trapped active particle? Journal of Statistical Mechanics: Theory and Experiment, 2021(3), Article 033216. https://doi.org/10.1088/1742-5468/abe6fd
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2021 | Journal Article | LibreCat-ID: 46123
Altenkort, L., Eller, A. M., Kaczmarek, O., Mazur, L., Moore, G. D., & Shu, H.-T. (2021). Sphaleron rate from Euclidean lattice correlators: An exploration. Physical Review D, 103(11), Article 114513. https://doi.org/10.1103/physrevd.103.114513
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2021 | Journal Article | LibreCat-ID: 24788 | OA
Alhaddad, S., Förstner, J., Groth, S., Grünewald, D., Grynko, Y., Hannig, F., Kenter, T., Pfreundt, F., Plessl, C., Schotte, M., Steinke, T., Teich, J., Weiser, M., & Wende, F. (2021). The HighPerMeshes framework for numerical algorithms on unstructured grids. Concurrency and Computation: Practice and Experience, e6616. https://doi.org/10.1002/cpe.6616
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2021 | Journal Article | LibreCat-ID: 28099 | OA
Menzel, J., Plessl, C., & Kenter, T. (2021). The Strong Scaling Advantage of FPGAs in HPC for N-body Simulations. ACM Transactions on Reconfigurable Technology and Systems, 15(1), 1–30. https://doi.org/10.1145/3491235
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2020 | Journal Article | LibreCat-ID: 32246
Mirhosseini, H., Kormath Madam Raghupathy, R., Sahoo, S. K., Wiebeler, H., Chugh, M., & Kühne, T. D. (2020). In silico investigation of Cu(In,Ga)Se2-based solar cells. Physical Chemistry Chemical Physics, 22(46), 26682–26701. https://doi.org/10.1039/d0cp04712k
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2020 | Journal Article | LibreCat-ID: 12878 | OA
Rengaraj, V., Lass, M., Plessl, C., & Kühne, T. (2020). Accurate Sampling with Noisy Forces from Approximate Computing. Computation, 8(2), Article 39. https://doi.org/10.3390/computation8020039
LibreCat | DOI | Download (ext.) | arXiv
 

2020 | Journal Article | LibreCat-ID: 16277 | OA
Kühne, T., Iannuzzi, M., Ben, M. D., Rybkin, V. V., Seewald, P., Stein, F., Laino, T., Khaliullin, R. Z., Schütt, O., Schiffmann, F., Golze, D., Wilhelm, J., Chulkov, S., Mohammad Hossein Bani-Hashemian, M. H. B.-H., Weber, V., Borstnik, U., Taillefumier, M., Jakobovits, A. S., Lazzaro, A., … Hutter, J. (2020). CP2K: An electronic structure and molecular dynamics software package - Quickstep: Efficient and accurate electronic structure calculations. The Journal of Chemical Physics, 152(19), Article 194103. https://doi.org/10.1063/5.0007045
LibreCat | Files available | DOI | Download (ext.) | arXiv
 

2019 | Journal Article | LibreCat-ID: 21
Richters, D., Lass, M., Walther, A., Plessl, C., & Kühne, T. (2019). A General Algorithm to Calculate the Inverse Principal p-th Root of Symmetric Positive Definite Matrices. Communications in Computational Physics, 25(2), 564–585. https://doi.org/10.4208/cicp.OA-2018-0053
LibreCat | DOI | arXiv
 

2019 | Journal Article | LibreCat-ID: 12871 | OA
Platzner, M., & Plessl, C. (2019). FPGAs im Rechenzentrum. Informatik Spektrum. https://doi.org/10.1007/s00287-019-01187-w
LibreCat | Files available | DOI
 

2019 | Journal Article | LibreCat-ID: 7689
Riebler, H., Vaz, G. F., Kenter, T., & Plessl, C. (2019). Transparent Acceleration for Heterogeneous Platforms with Compilation to OpenCL. ACM Trans. Archit. Code Optim. (TACO), 16(2), 14:1–14:26. https://doi.org/10.1145/3319423
LibreCat | Files available | DOI
 

2018 | Journal Article | LibreCat-ID: 6516
Mertens, J. C., Boschmann, A., Schmidt, M., & Plessl, C. (2018). Sprint diagnostic with GPS and inertial sensor fusion. Sports Engineering, 21(4), 441–451. https://doi.org/10.1007/s12283-018-0291-0
LibreCat | Files available | DOI
 

2018 | Journal Article | LibreCat-ID: 13348
Luk, S. M. H., Lewandowski, P., Kwong, N. H., Baudin, E., Lafont, O., Tignon, J., Leung, P. T., Chan, Ch. K. P., Babilon, M., Schumacher, S., & Binder, R. (2018). Theory of optically controlled anisotropic polariton transport in semiconductor double microcavities. Journal of the Optical Society of America B, 35(1), Article 146. https://doi.org/10.1364/josab.35.000146
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2018 | Journal Article | LibreCat-ID: 20
Lass, M., Kühne, T., & Plessl, C. (2018). Using Approximate Computing for the Calculation of Inverse Matrix p-th Roots. Embedded Systems Letters, 10(2), 33–36. https://doi.org/10.1109/LES.2017.2760923
LibreCat | DOI | arXiv
 

2017 | Journal Article | LibreCat-ID: 18
Riebler, H., Lass, M., Mittendorf, R., Löcke, T., & Plessl, C. (2017). Efficient Branch and Bound on FPGAs Using Work Stealing and Instance-Specific Designs. ACM Transactions on Reconfigurable Technology and Systems (TRETS), 10(3), 24:1-24:23. https://doi.org/10.1145/3053687
LibreCat | Files available | DOI
 

2017 | Journal Article | LibreCat-ID: 1589
Schumacher, J., Plessl, C., & Vandelli, W. (2017). High-Throughput and Low-Latency Network Communication with NetIO. Journal of Physics: Conference Series, 898, Article 082003. https://doi.org/10.1088/1742-6596/898/8/082003
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2016 | Journal Article | LibreCat-ID: 165
Vaz, G. F., Riebler, H., Kenter, T., & Plessl, C. (2016). Potential and Methods for Embedding Dynamic Offloading Decisions into Application Code. Computers and Electrical Engineering, 55, 91–111. https://doi.org/10.1016/j.compeleceng.2016.04.021
LibreCat | Files available | DOI
 

2015 | Journal Article | LibreCat-ID: 1768
Plessl, C., Platzner, M., & Schreier, P. J. (2015). Aktuelles Schlagwort: Approximate Computing. Informatik Spektrum, 5, 396–399. https://doi.org/10.1007/s00287-015-0911-z
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2015 | Journal Article | LibreCat-ID: 296
Kenter, T., Schmitz, H., & Plessl, C. (2015). Exploring Tradeoffs between Specialized Kernels and a Reusable Overlay in a Stereo-Matching Case Study. International Journal of Reconfigurable Computing (IJRC), 2015, Article 859425. https://doi.org/10.1155/2015/859425
LibreCat | Files available | DOI
 

2015 | Journal Article | LibreCat-ID: 1775
Anderson, J., Borga, A., Boterenbrood, H., Chen, H., Chen, K., Drake, G., Francis, D., Gorini, B., Lanni, F., Lehmann Miotto, G., Levinson, L., Narevicius, J., Plessl, C., Roich, A., Ryu, S., Schreuder, F., Schumacher, J., Vandelli, W., Vermeulen, J., & Zhang, J. (2015). FELIX: a High-Throughput Network Approach for Interfacing to Front End Electronics for ATLAS Upgrades. Journal of Physics: Conference Series, 664, Article 082050. https://doi.org/10.1088/1742-6596/664/8/082050
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2015 | Journal Article | LibreCat-ID: 1774
Peitz, S., & Dellnitz, M. (2015). Multiobjective Optimization of the Flow Around a Cylinder Using Model Order Reduction. PAMM, 15(1), 613–614. https://doi.org/10.1002/pamm.201510296
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2015 | Journal Article | LibreCat-ID: 1772
Torresen, J., Plessl, C., & Yao, X. (2015). Self-Aware and Self-Expressive Systems – Guest Editor’s Introduction. IEEE Computer, 48(7), 18–20. https://doi.org/10.1109/MC.2015.205
LibreCat | Files available | DOI
 

2015 | Journal Article | LibreCat-ID: 1769
Hegler, S., Statz, C., Mütze, M., Mooshofer, H., Goldammer, M., Fendt, K., … Plettemeier, D. (2015). Simulative Ultraschall-Untersuchung von Pitch-Catch-Messanordnungen für große zylindrische Stahl-Prüflinge und gradientenbasierte Bildgebung. Tm - Technisches Messen, 82(9), 440–450. https://doi.org/doi:10.1515/teme-2015-0031
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2014 | Journal Article | LibreCat-ID: 1779
Giefers, H., Plessl, C., & Förstner, J. (2014). Accelerating Finite Difference Time Domain Simulations with Reconfigurable Dataflow Computers. ACM SIGARCH Computer Architecture News, 41(5), 65–70. https://doi.org/10.1145/2641361.2641372
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2014 | Journal Article | LibreCat-ID: 328
Agne, A., Happe, M., Keller, A., Lübbers, E., Plattner, B., Platzner, M., & Plessl, C. (2014). ReconOS - An Operating System Approach for Reconfigurable Computing. IEEE Micro, 34(1), 60–71. https://doi.org/10.1109/MM.2013.110
LibreCat | Files available | DOI
 

2014 | Journal Article | LibreCat-ID: 365
Agne, A., Happe, M., Lösch, A., Plessl, C., & Platzner, M. (2014). Self-awareness as a Model for Designing and Operating Heterogeneous Multicores. ACM Transactions on Reconfigurable Technology and Systems (TRETS), 7(2), Article 13. https://doi.org/10.1145/2617596
LibreCat | Files available | DOI
 

2014 | Journal Article | LibreCat-ID: 363
Agne, A., Hangmann, H., Happe, M., Platzner, M., & Plessl, C. (2014). Seven Recipes for Setting Your FPGA on Fire – A Cookbook on Heat Generators. Microprocessors and Microsystems, 38(8, Part B), 911–919. https://doi.org/10.1016/j.micpro.2013.12.001
LibreCat | Files available | DOI
 

2013 | Journal Article | LibreCat-ID: 1792
Kasap, S., & Redif, S. (2013). Novel Field-Programmable Gate Array Architecture for Computing the Eigenvalue Decomposition of Para-Hermitian Polynomial Matrices. IEEE Trans. on Very Large Scale Integration (VLSI) Systems, 22(3), 522–536. https://doi.org/10.1109/TVLSI.2013.2248069
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2012 | Journal Article | LibreCat-ID: 2102
Gesing, S., Grunzke, R., Krüger, J., Birkenheuer, G., Wewior, M., Schäfer, P., … Kohlbacher, O. (2012). A Single Sign-On Infrastructure for Science Gateways on a Use Case for Structural Bioinformatics. Journal of Grid Computing, 10(4), 769–790. https://doi.org/10.1007/s10723-012-9247-y
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2012 | Journal Article | LibreCat-ID: 1965
Niehörster, O., Simon, J., Brinkmann, A., Keller, A., & Krüger, J. (2012). Cost-aware and SLO Fulfilling Software as a Service. Journal of Grid Computing, 10(3), 553–577. https://doi.org/10.1007/s10723-012-9230-7
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2012 | Journal Article | LibreCat-ID: 2108
Schumacher, T., Plessl, C., & Platzner, M. (2012). IMORC: An Infrastructure and Architecture Template for Implementing High-Performance Reconfigurable FPGA Accelerators. Microprocessors and Microsystems, 36(2), 110–126. https://doi.org/10.1016/j.micpro.2011.04.002
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2012 | Journal Article | LibreCat-ID: 2177
Grad, M., & Plessl, C. (2012). On the Feasibility and Limitations of Just-In-Time Instruction Set Extension for FPGA-based Reconfigurable Processors. Int. Journal of Reconfigurable Computing (IJRC). https://doi.org/10.1155/2012/418315
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2012 | Journal Article | LibreCat-ID: 2173
Redif, S., & Kasap, S. (2012). Parallel algorithm for computation of second-order sequential best rotations. Int. Journal of Electronics, 100(12), 1646–1651. https://doi.org/10.1080/00207217.2012.751343
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2012 | Journal Article | LibreCat-ID: 2174
Kasap, S., & Benkrid, K. (2012). Parallel Processor Design and Implementation for Molecular Dynamics Simulations on a FPGA Parallel Computer. Journal of Computers, 7(6), 1312–1328.
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2012 | Journal Article | LibreCat-ID: 2172
Thielemans, K., Tsoumpas, C., Mustafovic, S., Beisel, T., Aguiar, P., Dikaios, N., & W Jacobson, M. (2012). STIR: Software for Tomographic Image Reconstruction Release 2. Physics in Medicine and Biology, 57(4), 867–883. https://doi.org/10.1088/0031-9155/57/4/867
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2012 | Journal Article | LibreCat-ID: 2176
Herres-Pawlis, S., Birkenheuer, G., Brinkmann, A., Gesing, S., Grunzke, R., Jäkel, R., … Dos Santos Vieira, I. (2012). Workflow-enhanced conformational analysis of guanidine zinc complexes via a science gateway. Studies in Health Technology and Informatics, 175, 142–151. https://doi.org/10.3233/978-1-61499-054-3-142
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2011 | Journal Article | LibreCat-ID: 2201
Schumacher, T., Süß, T., Plessl, C., & Platzner, M. (2011). FPGA Acceleration of Communication-bound Streaming Applications: Architecture Modeling and a 3D Image Compositing Case Study. Int. Journal of Recon- Figurable Computing (IJRC). https://doi.org/10.1155/2011/760954
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2011 | Journal Article | LibreCat-ID: 2192
Birkenheuer, G., Brinkmann, A., Högqvist, M., Papaspyrou, A., Schott, B., Sommerfeld, D., & Ziegler, W. (2011). Infrastructure Federation Through Virtualized Delegation of Resources and Services. Journal of Grid Computing, 9(3), 355–377. https://doi.org/10.1007/s10723-011-9192-1
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2011 | Journal Article | LibreCat-ID: 1971
Birkenheuer, G., Brinkmann, A., Kaiser, J., Keller, A., Keller, M., Kleineweber, C., … Wilhelm, M. (2011). Virtualized HPC: a contradiction in terms? Software: Practice and Experience. https://doi.org/10.1002/spe.1055
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2010 | Journal Article | LibreCat-ID: 2235
Brinkmann, A., Battré, D., Birkenheuer, G., Kao, O., & Voß, K. (2010). Risikomanagement für verteilte Umgebungen. ForschungsForum Paderborn, 13(13).
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2009 | Journal Article | LibreCat-ID: 2354
Brinkmann, A., & Eschweiler, D. (2009). A Microdriver Architecture for Error Correcting Codes inside the Linux Kernel. Journal of Supercomputing, 35:1-35:10. https://doi.org/10.1145/1654059.1654095
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2006 | Journal Article | LibreCat-ID: 2405
Groppe, S., Böttcher, S., Birkenheuer, G., & Höing, A. (2006). Reformulating XPath queries and XSLT queries on XSLT views. Data & Knowledge Engineering, 57(1), 64–110. https://doi.org/10.1016/j.datak.2005.04.002
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2001 | Journal Article | LibreCat-ID: 1999
Keller, A., & Reinefeld, A. (2001). Anatomy of a Resource Management System for HPC Clusters. Annual Review of Scalable Computing, 3, 1–31. https://doi.org/10.1142/9789812810182_0001
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1999 | Journal Article | LibreCat-ID: 2007
Brune, M., Gehring, J., Keller, A., & Reinefeld, A. (1999). Managing Clusters of Geographically Distributed High-Performance Computers. Concurrency, Practice, and Experience, II(15), 887–911. https://doi.org/10.1002/(SICI)1096-9128(19991225)11:15<887::AID-CPE459>3.0.CO;2-J
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1998 | Journal Article | LibreCat-ID: 2012
Brune, M., Gehring, J., Keller, A., & Monien, B. (1998). Specifying Resources and Services in Metacomputing Environments. Parallel Computing, 24, 1751–1776. https://doi.org/10.1016/S0167-8191(98)00076-3
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1998 | Journal Article | LibreCat-ID: 2437
Simon, J., & Wierum, J.-M. (1998). The Latency-of-Data-Access model for Analyzing Parallel Computation. Information Processing Letters - Special Issue on Models of Computation, 66(5), 255–261. https://doi.org/10.1016/S0020-0190(98)00062-3
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