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449 Publications


2012 | Journal Article | LibreCat-ID: 16092
Fingerprint kernels for protein structure comparison
T. Fober, M. Mernberger, G. Klebe, E. Hüllermeier, Molecular Informatics 31 (2012) 443–452.
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2012 | Journal Article | LibreCat-ID: 16093
Comparing fuzzy partitions: A generalization of the Rand index and related measures
E. Hüllermeier, M. Rifqi, S. Henzgen, R. Senge, IEEE Transactions on Fuzzy Systems 20 (2012) 546–556.
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2012 | Journal Article | LibreCat-ID: 16094
Fuzzy Pattern Trees: Ein alternativer Ansatz zur Fuzzy-Modellierung
R. Senge, T. Fober, N. Nasiri, E. Hüllermeier, At-Atomatisierungstechnik 60 (2012) 622–629.
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2012 | Conference Paper | LibreCat-ID: 13120
Label ranking with partial abstention based on thresholded probalistic models
W. Cheng, E. Hüllermeier, W. Waegeman, V. Welker, in: In Proceedings NIPS-2012, 26th Annual Conference on Neural Information Processing Systems, Lake Tahoe, Nevada, USA, 2012.
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2012 | Conference Paper | LibreCat-ID: 13191
Probability estimation for mulit-class classification based on label ranking
W. Cheng, E. Hüllermeier, in: Proceedings ECML/PKDD-2012, European Conference on Machine Learning and Principles and Practice of Knowledge Discovery in Databases, Bristol, UK, 2012.
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2012 | Conference Paper | LibreCat-ID: 13192
Consistent multilabel ranking through univariate loss minimization
K. Dembczynski, W. Kotlowski, E. Hüllermeier, in: J. Langford, J. Pineau (Eds.), In Proceedings ICML-2012,  International Conference on Machine Learning, Edinburgh, Scotland, 2012.
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2012 | Conference Paper | LibreCat-ID: 13193
An analysis of chaining in multi-label classification
K. Dembczynski, W. Waegeman, E. Hüllermeier, in: In Proceedings ECAI-2012, 20th European Conference on Artificial Inteligence, Montpellier, France , IOS Press, 2012, pp. 294–299.
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2012 | Book Chapter | LibreCat-ID: 10153
Fuzzy rules in data mining: From fuzzy associations to gradual dependencies
E. Hüllermeier, in: E. Trillas, P.P. Bonissone, L. Magdalena, J. Kacprzyk (Eds.), Combining Experimentation and Theory, Springer, 2012, pp. 123–135.
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2011 | Conference Paper | LibreCat-ID: 15762
Joint mode estimation in multi-label classification by chaining
K. Dembczynski, W. Waegeman, E. Hüllermeier, in: In Proceedings ECML Workshop on Collective Inference and Learning on Structured Data, Athens, Greece, 2011.
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2011 | Conference Paper | LibreCat-ID: 15764
Prediction of protein localization for specialized compartments using time series kernels
M. Mernberger, D. Moog, S. Stork, S. Zauner, U. Maier, E. Hüllermeier, in: In Proceedings GCB-2011 German Conference on Bioinformatics Munich, Germany, 2011.
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2011 | Conference Paper | LibreCat-ID: 15115
Comparing methods for knowledge-driven and data-driven fuzzy modeling: A case study in textile industry
M. Nasiri, E. Hüllermeier, R. Senge, E. Lughofer, in: In Proceedings IFSA-2011 World Congress of the International Fuzzy Systems Association, Surabaya and Bali Island, Indonesia, 2011, p. RW-103-1-6.
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2011 | Conference Paper | LibreCat-ID: 15116
On-line redundancy deletion in evolving fuzzy regression models using a fuzzy inclusion measure
E. Lughofer, E. Hüllermeier, in: S. Galichet, J. Montero, G. Mauris (Eds.), In Proceedings EUSFLAT-2011 7th International Conference on the European Society for Fuzzy Logic and Technology, Aix-Les-Bains, France, 2011, pp. 380–387.
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2011 | Conference Paper | LibreCat-ID: 15117
Choquistic regression: Generalizing logistic regression using the Choquet integral
A. Fallah Tehrani, W. Cheng, E. Hüllermeier, in: In Proceedings EUSFLAT-2011 7th International Conference on the European Society for Fuzzy Logic and Technology, Aix-Les-Bains, France, 2011, pp. 868–875.
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2011 | Journal Article | LibreCat-ID: 16119
Multivariate modeling to identify patterns in clinical data: The example of chest pain
O. Hirsch, S. Bösner, E. Hüllermeier, R. Senge, K. Dembczynski, N. Donner-Banzhoff, BMC Medical Research Methodology 11 (2011).
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2011 | Journal Article | LibreCat-ID: 16126
Preferences in AL: An overview
C. Domshlak, E. Hüllermeier, S. Kaci, H. Prade, Artificial Intelligence 175 (2011) 1037–1052.
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2011 | Journal Article | LibreCat-ID: 16147
Fuzzy machine learning and data mining
E. Hüllermeier, WIREs Data Mining and Knowledge Discovery 1 (2011) 269–283.
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2011 | Journal Article | LibreCat-ID: 16148
SEGA: Semi-global graph alignment for structure-based protein comparison
M. Mernberger, G. Klebe, E. Hüllermeier, IEEE/ACM Transactions of Computational Biology and Bioinformatics 8 (2011) 1330–1343.
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2011 | Journal Article | LibreCat-ID: 16149
Superposition and alignment of labeled point clouds
T. Fober, S. Glinca, G. Klebe, E. Hüllermeier, IEEE/ACM Transactions on Computational Biology and Bioinformatics 8 (2011) 1653–1666.
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2011 | Journal Article | LibreCat-ID: 16150
Fuzzy sets in machine learning and data mining
E. Hüllermeier, Applied Soft Computing Journal (2011) 1493–1505.
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2011 | Journal Article | LibreCat-ID: 16153
Top-down induction of fuzzy pattern trees
R. Senge, E. Hüllermeier, IEEE Transactions on Fuzzy Systems 19 (2011) 241–252.
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2011 | Conference Paper | LibreCat-ID: 13194
An exact algorithm for F-measure maximization
K. Dembczynski, W. Waegeman, W. Cheng, E. Hüllermeier, in: In Proceedings NIPS-2011, 25th Annual Conference on Neural Information Processing Systems, Granada, Spain, 2011.
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2011 | Conference Paper | LibreCat-ID: 13196
Learning from label preferences
J. Fürnkranz, E. Hüllermeier, in: T. Elomaa, J. Hollmen, H. Mannila (Eds.), In Proceedings DS-2011, 14th International  Conference on Discovery Science, Number 6926 in LNAI, Springer, 2011, pp. 2–17.
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2011 | Conference Paper | LibreCat-ID: 13197
Learning monotone nonlinear models using the Choquet integral
A. Fallah Tehrani, W. Cheng, K. Dembczynski, E. Hüllermeier, in: In Proceedings ECML/PKDD-2011, European Conference on Machine Learning and Principles and Practice of Knowledge Discovery in Databases, Athens, Greece, 2011.
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2011 | Conference Paper | LibreCat-ID: 13198
Preference-based CBR: First steps toward a methodological framework
E. Hüllermeier, P. Schlegel, in: A. Ram, N. Wiratunga (Eds.), In Proceedings ICCBR-2011, 19th International Conference on Case-Based Reasoning, Number 6880 in LNAI, Springer, 2011, pp. 77–91.
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2011 | Conference Paper | LibreCat-ID: 13588
Bipartite ranking through minimization of univariate loss
W. Kotlowski, K. Dembczynski, E. Hüllermeier, in: In Proceedings ICML-2011, 28th International Conference on Machine Learning, Washington, USA, 2011.
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2010 | Book Chapter | LibreCat-ID: 15297
An Analysis of the FURIA algorithm for fuzzy rule induction
E. Hüllermeier, J. Hühn, in: J. Koronacki, Z.W. Ras, S.T. Wierzchon, J. Kacprzyk (Eds.), Advances in Machine Learning I: Dedicated to the Memory of Professor Ryszard S.Michalski, Springer, 2010, pp. 321–344.
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2010 | Book Chapter | LibreCat-ID: 15298
Preference Learning: An Introduction
J. Fürnkranz, E. Hüllermeier, in: J. Fürnkranz, E. Hüllermeier (Eds.), Preference Learning, Springer, 2010, pp. 1–18.
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2010 | Conference Paper | LibreCat-ID: 15765
Efficient similarity retrieval for protein binding sites based on histogram comparison
T. Fober, M. Mernberger, G. Klebe, E. Hüllermeier, in: In Proceedings GCB-2010 German Conference on Bioinformatics Braunschweig, Germany, 2010, pp. 51–60.
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2010 | Conference Paper | LibreCat-ID: 15772
On label dependence in multi-label classification
K. Dembczynski, W. Waegeman, W. Cheng, E. Hüllermeier, in: In Proceedings MLD-2010, 2nd International Workshop on Learning from Multi-Label Data, Haifa, Israel, 2010.
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2010 | Conference Paper | LibreCat-ID: 15118
Similarity measures for protein structures based on fuzzy histogram comparison
T. Fober, E. Hüllermeier, in: In Proceedings WCCI-2010, World Congress on Computational Intelligence, Barcelona, Spain, 2010.
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2010 | Conference Paper | LibreCat-ID: 15119
Pattern trees for regression and fuzzy systems modeling
R. Senge, E. Hüllermeier, in: In Proceedings WCCI-2010, World Congress on Computational Intelligence, Barcelona, Spain, 2010.
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2010 | Journal Article | LibreCat-ID: 16121
GARLig: A fully automated tool for subset selection of large fragment spaces via a self-adaptive genetic algorithm
P. Pfeffer, T. Fober, E. Hüllermeier, G. Klebe, Journal of Chemical Information and Modeling 50 (2010) 1644–1659.
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2010 | Journal Article | LibreCat-ID: 16151 LibreCat
 

2010 | Journal Article | LibreCat-ID: 16152
On predictive accuracy and risk minimization in pairwise label ranking
E. Hüllermeier, J. Fürnkranz, Journal of Computer and System Sciences 76 (2010) 49–62.
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2010 | Conference Paper | LibreCat-ID: 13589
Bayes optimal multilabel classification via probalistic classifier chains
K. Dembczynski, W. Cheng, E. Hüllermeier, in: J. Fürnkranz, T. Joachims (Eds.), In Proceedings ICML-2010, 27th International Conference on Machine Learning, Haifa, Israel, 2010, pp. 279–286.
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2010 | Conference Paper | LibreCat-ID: 13590
Label ranking based on the Plackett-Luce model
W. Cheng, K. Dembczynski, E. Hüllermeier, in: J. Fürnkranz, T. Joachims (Eds.), In Proceedings ICML-2010, 27th International Conference on Machine Learning, Haifa, Israel, 2010, pp. 215–222.
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2010 | Conference Paper | LibreCat-ID: 13591
Graded multi-label classification: The ordinal case
W. Cheng, K. Dembczynski, E. Hüllermeier, in: J. Fürnkranz, T. Joachims (Eds.), In Proceedings ICML-2010, 27th International Conference on Machine Learning, Haifa, Israel, 2010.
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2010 | Conference Paper | LibreCat-ID: 13593
Regret analysis for performance metrics in multi-label classification: The case of Hamming and subset zero-one loss
K. Dembczynski, W. Waegeman, W. Cheng, E. Hüllermeier, in: In Proceedings ECML/PKDD-2010, European Conference on Machine Learning and Principles and Practice of Knowledge Discovery in Databases, ,Bareclona, Spain, 2010.
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2010 | Conference Paper | LibreCat-ID: 13594
Predicting partial orders: Ranking with abstention
W. Cheng, M. Rademaker, B. De Beats, E. Hüllermeier, in: In Proceedings ECML/PKDD-2010, European Conference on Machine Learning and Principles and Practice of Knowledge Discovery in Databases, ,Bareclona, Spain, 2010.
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2010 | Conference Paper | LibreCat-ID: 13597
Uncertainty in clustering and classification
E. Hüllermeier, in: In Proceedings SUM 2010, International Conference on Scalable Uncertainty Management , Springer, 2010, pp. 16–19.
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2009 | Conference Paper | LibreCat-ID: 15773
A simple instance-based approach to multilabel classification using the Mallows model
W. Cheng, E. Hüllermeier, in: In Proceedings MLD-2009 1st  International Workshop on Learning from Multi-Label Data, Bled, Slovenia, 2009, pp. 28–38.
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2009 | Conference Paper | LibreCat-ID: 15774
Learning pattern tree classifiers using a co-evolutionary algorithm
R. Senge, E. Hüllermeier, in: F. Hoffmann, E. Hüllermeier (Eds.), In Proceedings 19th Workshop Computational Intelligence, Dortmund Germany, KIT Scientific Publishing, 2009, pp. 22–33.
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2009 | Conference Paper | LibreCat-ID: 15775
Graph-kernels for the comparative analysis of protein active sites
T. Fober, M. Mernberger, R. Moritz, E. Hüllermeier, in: I. Grosse, S. Neumann, S. Posch, F. Schreiber, P.. Stadler (Eds.), In Proceedings GCB-2009 German Conference on Bioinformatics Halle (Saale), Germany, 2009, pp. 21–31.
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2009 | Conference Paper | LibreCat-ID: 15776
Learning pattern tree classifiers using a co-evolutionary algorithm
R. Senge, E. Hüllermeier, in: In Proceedings Workshop LWA-2009, Lernen-Wissensentdeckung-Adaptivität, Darmstadt, Germany, 2009, pp. 105–110.
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2009 | Conference Paper | LibreCat-ID: 15778
Extension and empirical comparison of graph-kernels for the analysis of protein active sites
T. Fober, M. Mernberger, V. Melnikov, R. Moritz, E. Hüllermeier, in: In Proceedings Workshop LWA-2009, Lernen-Wissensentdeckung-Adaptivität, Darmstadt, Germany, 2009, pp. 30–36.
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2009 | Conference Paper | LibreCat-ID: 15120
Efficient construction of multiple geometrical alignments for the comparison of protein binding sites
T. Fober, G. Klebe, E. Hüllermeier, in: In Proceedings ISDA-2009, 9th International Conference on Intelligent Systems Design and Applications, Pisa, Italy, 2009, pp. 1251–1256.
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2009 | Conference Paper | LibreCat-ID: 15194
Similarity analysis of protein binding sites: A generalization of the maximum common subgraph measure based on quasi-clique detection
I. Boukhris, Z. Elouedi, T. Fober, M. Mernberger, E. Hüllermeier, in: In Proceedings IDA-2009, 9th International Symposium on Intelligent Data Analysis, Pisa / Italy, 2009, pp. 1245–1250.
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2009 | Conference Paper | LibreCat-ID: 15195
Fuzzy modeling of labeled point cloud superposition for the comparison of protein binding sites
T. Fober, E. Hüllermeier, in: In Proceedings IFSA / EUSFLAT-2009 World Congress of  the Fuzzy Systems Association, Lissabon, Portugal, 2009, pp. 1299–1304.
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2009 | Conference Paper | LibreCat-ID: 15196
A fuzzy variant of the Rand index for comparing clustering structures
E. Hüllermeier, M. Rifqi, in: In Proceedings IFSA / EUSFLAT-2009 World Congress of  the Fuzzy Systems Association, Lissabon, Portugal, 2009, pp. 1294–1298.
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2009 | Journal Article | LibreCat-ID: 16154
Merging chemical and biological space: Structural mapping of enzyme binding pocket space
N. Weskamp, E. Hüllermeier, G. Klebe, Proteins 76 (2009) 317–330.
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