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326 Publications


2024 | Journal Article | LibreCat-ID: 53474
Lass, Michael, Tobias Kenter, Christian Plessl, and Martin Brehm. “Characterizing Microheterogeneity in Liquid Mixtures via Local Density Fluctuations.” Entropy 26, no. 4 (2024). https://doi.org/10.3390/e26040322.
LibreCat | DOI
 

2024 | Journal Article | LibreCat-ID: 53663 | OA
Bauer, Carsten, Tobias Kenter, Michael Lass, Lukas Mazur, Marius Meyer, Holger Nitsche, Heinrich Riebler, et al. “Noctua 2 Supercomputer.” Journal of Large-Scale Research Facilities 9 (2024). https://doi.org/10.17815/jlsrf-8-187 .
LibreCat | Files available | DOI
 

2024 | Conference Paper | LibreCat-ID: 53503
Olgu, Kaan, Tobias Kenter, Jose Nunez-Yanez, and Simon Mcintosh-Smith. “Optimisation and Evaluation of Breadth First Search with OneAPI/SYCL on Intel FPGAs: From Describing Algorithms to Describing Architectures.” In Proceedings of the 12th International Workshop on OpenCL and SYCL. ACM, 2024. https://doi.org/10.1145/3648115.3648134.
LibreCat | DOI
 

2024 | Preprint | LibreCat-ID: 53364
Meyer, Marius, Tobias Kenter, Lucian Petrica, Kenneth O’Brien, Michaela Blott, and Christian Plessl. “Optimizing Communication for Latency Sensitive HPC Applications on up to 48 FPGAs Using ACCL.” ArXiv:2403.18374, 2024.
LibreCat | arXiv
 

2024 | Preprint | LibreCat-ID: 53202
Schapeler, Timon, Robert Schade, Michael Lass, Christian Plessl, and Tim Bartley. “Scalable Quantum Detector Tomography by High-Performance Computing.” ArXiv:2404.02844, 2024.
LibreCat | arXiv
 

2023 | Preprint | LibreCat-ID: 43439
Van Hirtum, Lennart, Patrick De Causmaecker, Jens Goemaere, Tobias Kenter, Heinrich Riebler, Michael Lass, and Christian Plessl. “A Computation of D(9) Using FPGA Supercomputing.” ArXiv:2304.03039, 2023.
LibreCat | arXiv
 

2023 | Journal Article | LibreCat-ID: 45361 | OA
Schade, Robert, Tobias Kenter, Hossam Elgabarty, Michael Lass, Thomas Kühne, and Christian Plessl. “Breaking the Exascale Barrier for the Electronic Structure Problem in Ab-Initio Molecular Dynamics.” The International Journal of High Performance Computing Applications, 2023. https://doi.org/10.1177/10943420231177631.
LibreCat | DOI | Download (ext.)
 

2023 | Book Chapter | LibreCat-ID: 45893 | OA
Hansmeier, Tim, Tobias Kenter, Marius Meyer, Heinrich Riebler, Marco Platzner, and Christian Plessl. “Compute Centers I: Heterogeneous Execution Environments.” In On-The-Fly Computing -- Individualized IT-Services in Dynamic Markets, edited by Claus-Jochen Haake, Friedhelm Meyer auf der Heide, Marco Platzner, Henning Wachsmuth, and Heike Wehrheim, 412:165–82. Verlagsschriftenreihe Des Heinz Nixdorf Instituts. Paderborn: Heinz Nixdorf Institut, Universität Paderborn, 2023. https://doi.org/10.5281/zenodo.8068642.
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2023 | Conference Paper | LibreCat-ID: 43228
Wu, Xin, Tobias Kenter, Robert Schade, Thomas Kühne, and Christian Plessl. “Computing and Compressing Electron Repulsion Integrals on FPGAs.” In 2023 IEEE 31st Annual International Symposium on Field-Programmable Custom Computing Machines (FCCM), 162–73, 2023. https://doi.org/10.1109/FCCM57271.2023.00026.
LibreCat | DOI | Download (ext.) | arXiv
 

2023 | Conference Paper | LibreCat-ID: 46189
Prouveur, Charles, Matthieu Haefele, Tobias Kenter, and Nils Voss. “FPGA Acceleration for HPC Supercapacitor Simulations.” In Proceedings of the Platform for Advanced Scientific Computing Conference (PASC). ACM, 2023. https://doi.org/10.1145/3592979.3593419.
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2023 | Preprint | LibreCat-ID: 50172
Ochsenfeld, Stephan, and Sören Schlichting. “Hydrodynamic and Non-Hydrodynamic Excitations in Kinetic Theory -- A  Numerical Analysis in Scalar Field Theory.” ArXiv:2308.04491, 2023.
LibreCat | arXiv
 

2023 | Preprint | LibreCat-ID: 50221
Pleines, Marco, Matthias Pallasch, Frank Zimmer, and Mike Preuss. “Memory Gym: Towards Endless Tasks to Benchmark Memory Capabilities of  Agents.” ArXiv:2309.17207, 2023.
LibreCat | arXiv
 

2023 | Journal Article | LibreCat-ID: 38041 | OA
Meyer, Marius, Tobias Kenter, and Christian Plessl. “Multi-FPGA Designs and Scaling of HPC Challenge Benchmarks via MPI and Circuit-Switched Inter-FPGA Networks.” ACM Transactions on Reconfigurable Technology and Systems, 2023. https://doi.org/10.1145/3576200.
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2023 | Conference Paper | LibreCat-ID: 46190 | OA
Opdenhövel, Jan-Oliver, Christian Plessl, and Tobias Kenter. “Mutation Tree Reconstruction of Tumor Cells on FPGAs Using a Bit-Level Matrix Representation.” In Proceedings of the 13th International Symposium on Highly Efficient Accelerators and Reconfigurable Technologies. ACM, 2023. https://doi.org/10.1145/3597031.3597050.
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2023 | Conference Paper | LibreCat-ID: 46188
Faj, Jennifer, Tobias Kenter, Sara Faghih-Naini, Christian Plessl, and Vadym Aizinger. “Scalable Multi-FPGA Design of a Discontinuous Galerkin Shallow-Water Model on Unstructured Meshes.” In Proceedings of the Platform for Advanced Scientific Computing Conference (PASC). ACM, 2023. https://doi.org/10.1145/3592979.3593407.
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2023 | Book Chapter | LibreCat-ID: 46191
Alt, Christoph, Tobias Kenter, Sara Faghih-Naini, Jennifer Faj, Jan-Oliver Opdenhövel, Christian Plessl, Vadym Aizinger, Jan Hönig, and Harald Köstler. “Shallow Water DG Simulations on FPGAs: Design and Comparison of a Novel Code Generation Pipeline.” In Lecture Notes in Computer Science. Cham: Springer Nature Switzerland, 2023. https://doi.org/10.1007/978-3-031-32041-5_5.
LibreCat | DOI
 

2023 | Journal Article | LibreCat-ID: 46120
Mazur, Lukas, Dennis Bollweg, David A. Clarke, Luis Altenkort, Olaf Kaczmarek, Rasmus Larsen, Hai-Tao Shu, et al. “SIMULATeQCD: A Simple Multi-GPU Lattice Code for QCD Calculations.” Computer Physics Communications, 2023. https://doi.org/10.48550/ARXIV.2306.01098.
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2023 | Journal Article | LibreCat-ID: 46119
Altenkort, Luis, Alexander M. Eller, Anthony Francis, Olaf Kaczmarek, Lukas Mazur, Guy D. Moore, and Hai-Tao Shu. “Viscosity of Pure-Glue QCD from the Lattice.” Physical Review D 108, no. 1 (2023). https://doi.org/10.1103/physrevd.108.014503.
LibreCat | DOI
 

2022 | Conference Paper | LibreCat-ID: 46193 | OA
Karp, Martin, Artur Podobas, Tobias Kenter, Niclas Jansson, Christian Plessl, Philipp Schlatter, and Stefano Markidis. “A High-Fidelity Flow Solver for Unstructured Meshes on Field-Programmable Gate Arrays: Design, Evaluation, and Future Challenges.” In International Conference on High Performance Computing in Asia-Pacific Region. ACM, 2022. https://doi.org/10.1145/3492805.3492808.
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2022 | Preprint | LibreCat-ID: 36879 | OA
Churavy, Valentin, William F Godoy, Carsten Bauer, Hendrik Ranocha, Michael Schlottke-Lakemper, Ludovic Räss, Johannes Blaschke, et al. “Bridging HPC Communities through the Julia Programming Language,” 2022.
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2022 | Dissertation | LibreCat-ID: 32414
Lass, Michael. Bringing Massive Parallelism and Hardware Acceleration to Linear Scaling Density Functional Theory Through Targeted Approximations. Paderborn: Universität Paderborn, 2022. https://doi.org/10.17619/UNIPB/1-1281.
LibreCat | DOI
 

2022 | Preprint | LibreCat-ID: 32404
Kühne, Thomas, Christian Plessl, Robert Schade, and Ole Schütt. “CP2K on the Road to Exascale.” ArXiv:2205.14741, 2022.
LibreCat | Download (ext.) | arXiv
 

2022 | Journal Article | LibreCat-ID: 32234
Wojciechowski, M. “Dataset for Random Uniform Distributions of 2D Circles and 3D Spheres.” Data Brief 43 (2022): 108318.
LibreCat | PubMed | Europe PMC
 

2022 | Preprint | LibreCat-ID: 32177
Borghini, Nicolas, Marc Borrell, and Hendrik Roch. “Early Time Behavior of Spatial and Momentum Anisotropies in Kinetic  Theory across Different Knudsen Numbers.” ArXiv:2201.13294, 2022.
LibreCat | arXiv
 

2022 | Preprint | LibreCat-ID: 32178
Bachmann, Benedikt, Nicolas Borghini, Nina Feld, and Hendrik Roch. “Even Anisotropic-Flow Harmonics Are from Venus, Odd Ones Are from Mars.” ArXiv:2203.13306, 2022.
LibreCat | arXiv
 

2022 | Journal Article | LibreCat-ID: 27364
Meyer, Marius, Tobias Kenter, and Christian Plessl. “In-Depth FPGA Accelerator Performance Evaluation with Single Node Benchmarks from the HPC Challenge Benchmark Suite for Intel and Xilinx FPGAs Using OpenCL.” Journal of Parallel and Distributed Computing, 2022. https://doi.org/10.1016/j.jpdc.2021.10.007.
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2022 | Journal Article | LibreCat-ID: 46121
Altenkort, Luis, Alexander M. Eller, O. Kaczmarek, Lukas Mazur, Guy D. Moore, and Hai-Tao Shu. “Lattice QCD Noise Reduction for Bosonic Correlators through Blocking.” Physical Review D 105, no. 9 (2022). https://doi.org/10.1103/physrevd.105.094505.
LibreCat | DOI
 

2022 | Journal Article | LibreCat-ID: 32183
Hou, W, Y Yao, Y Li, B Peng, K Shi, Z Zhou, J Pan, M Liu, and J Hu. “Linearly Shifting Ferromagnetic Resonance Response of La0.7Sr0.3MnO3 Thin Film for Body Temperature Sensors.” Frontiers of Materials Science 16, no. 1 (2022).
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2022 | Journal Article | LibreCat-ID: 40523
Jonas, B., Dirk Florian Heinze, E. Schöll, P. Kallert, T. Langer, S. Krehs, A. Widhalm, et al. “Nonlinear Down-Conversion in a Single Quantum Dot.” Nature Communications 13, no. 1 (2022). https://doi.org/10.1038/s41467-022-28993-3.
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2022 | Journal Article | LibreCat-ID: 33226 | OA
Schade, Robert, Carsten Bauer, Konstantin Tamoev, Lukas Mazur, Christian Plessl, and Thomas Kühne. “Parallel Quantum Chemistry on Noisy Intermediate-Scale Quantum Computers.” Phys. Rev. Research 4 (2022): 033160. https://doi.org/10.1103/PhysRevResearch.4.033160.
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2022 | Journal Article | LibreCat-ID: 50149
Lesch, Elena, Maximilian T Schilling, Sarah Brenner, Yingying Yang, Oliver J Gruss, Volker Knoop, and Mareike Schallenberg-Rüdinger. “Plant Mitochondrial RNA Editing Factors Can Perform Targeted C-to-U Editing of Nuclear Transcripts in Human Cells.” Nucleic Acids Research 50, no. 17 (2022): 9966–83. https://doi.org/10.1093/nar/gkac752.
LibreCat | DOI
 

2022 | Preprint | LibreCat-ID: 33493
Gavini, Vikram, Stefano Baroni, Volker Blum, David R. Bowler, Alexander Buccheri, James R. Chelikowsky, Sambit Das, et al. “Roadmap on Electronic Structure Codes in the Exascale Era.” ArXiv:2209.12747, 2022.
LibreCat | arXiv
 

2022 | Preprint | LibreCat-ID: 46275
Gavini, Vikram, Stefano Baroni, Volker Blum, David R. Bowler, Alexander Buccheri, James R. Chelikowsky, Sambit Das, et al. “Roadmap on Electronic Structure Codes in the Exascale Era.” ArXiv:2209.12747, 2022.
LibreCat | arXiv
 

2022 | Journal Article | LibreCat-ID: 50146
Moroder, Mattia, Martin Grundner, François Damanet, Ulrich Schollwöck, Sam Mardazad, Stuart Flannigan, Thomas Köhler, and Sebastian Paeckel. “Stable Bipolarons in Open Quantum Systems.” Physical Review B 107, 214310 (2023), 2022. https://doi.org/10.1103/PhysRevB.107.214310.
LibreCat | DOI | arXiv
 

2022 | Journal Article | LibreCat-ID: 50148
Borghini, Nicolas, Marc Borrell, Nina Feld, Hendrik Roch, Sören Schlichting, and Clemens Werthmann. “Statistical Analysis of Initial State and Final State Response in  Heavy-Ion Collisions.” Phys. Rev. C 107 (2023) 034905, 2022. https://doi.org/10.1103/PhysRevC.107.034905.
LibreCat | DOI | arXiv
 

2022 | Journal Article | LibreCat-ID: 33684 | OA
Schade, Robert, Tobias Kenter, Hossam Elgabarty, Michael Lass, Ole Schütt, Alfio Lazzaro, Hans Pabst, et al. “Towards Electronic Structure-Based Ab-Initio Molecular Dynamics Simulations with Hundreds of Millions of Atoms.” Parallel Computing 111 (2022). https://doi.org/10.1016/j.parco.2022.102920.
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2021 | Conference Paper | LibreCat-ID: 46194
Kenter, Tobias, Adesh Shambhu, Sara Faghih-Naini, and Vadym Aizinger. “Algorithm-Hardware Co-Design of a Discontinuous Galerkin Shallow-Water Model for a Dataflow Architecture on FPGA.” In Proceedings of the Platform for Advanced Scientific Computing Conference (PASC). ACM, 2021. https://doi.org/10.1145/3468267.3470617.
LibreCat | Files available | DOI | Download (ext.)
 

2021 | Journal Article | LibreCat-ID: 32240
Chatwell, René Spencer, Gabriela Guevara-Carrion, Yuri Gaponenko, Valentina Shevtsova, and Jadran Vrabec. “Diffusion of the Carbon Dioxide–Ethanol Mixture in the Extended Critical Region.” Physical Chemistry Chemical Physics 23, no. 4 (2021): 3106–15. https://doi.org/10.1039/d0cp04985a.
LibreCat | DOI
 

2021 | Journal Article | LibreCat-ID: 46122
Kaczmarek, Olaf, Lukas Mazur, and Sayantan Sharma. “Eigenvalue Spectra of QCD and the Fate of <mml:Math Xmlns:Mml="http://Www.W3.Org/1998/Math/MathML" Display="inline"><mml:Msub><mml:Mi>U</Mml:Mi><mml:Mi>A</Mml:Mi></Mml:Msub><mml:Mo Stretchy="false">(</Mml:Mo><mml:Mn>1</Mml:Mn><mml:Mo Stretchy="false">)</Mml:Mo></Mml:Math> Breaking towards the Chiral Limit.” Physical Review D 104, no. 9 (2021). https://doi.org/10.1103/physrevd.104.094518.
LibreCat | DOI
 

2021 | Book Chapter | LibreCat-ID: 29936
Ramaswami, Arjun, Tobias Kenter, Thomas Kühne, and Christian Plessl. “Evaluating the Design Space for Offloading 3D FFT Calculations to an FPGA for High-Performance Computing.” In Applied Reconfigurable Computing. Architectures, Tools, and Applications. Cham: Springer International Publishing, 2021. https://doi.org/10.1007/978-3-030-79025-7_21.
LibreCat | DOI
 

2021 | Conference Paper | LibreCat-ID: 20886
Nickchen, Tobias, Stefan Heindorf, and Gregor Engels. “Generating Physically Sound Training Data for Image Recognition of Additively Manufactured Parts.” In Proceedings of the IEEE/CVF Winter Conference on Applications of Computer Vision, 1994–2002, 2021.
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2021 | Journal Article | LibreCat-ID: 46124
Altenkort, Luis, Alexander M. Eller, O. Kaczmarek, Lukas Mazur, Guy D. Moore, and H.-T. Shu. “Heavy Quark Momentum Diffusion from the Lattice Using Gradient Flow.” Physical Review D 103, no. 1 (2021). https://doi.org/10.1103/physrevd.103.014511.
LibreCat | DOI
 

2021 | Conference Paper | LibreCat-ID: 46195
Karp, Martin, Artur Podobas, Niclas Jansson, Tobias Kenter, Christian Plessl, Philipp Schlatter, and Stefano Markidis. “High-Performance Spectral Element Methods on Field-Programmable Gate Arrays : Implementation, Evaluation, and Future Projection.” In 2021 IEEE International Parallel and Distributed Processing Symposium (IPDPS). IEEE, 2021. https://doi.org/10.1109/ipdps49936.2021.00116.
LibreCat | DOI
 

2021 | Conference Paper | LibreCat-ID: 29937
Karp, Martin, Artur Podobas, Niclas Jansson, Tobias Kenter, Christian Plessl, Philipp Schlatter, and Stefano Markidis. “High-Performance Spectral Element Methods on Field-Programmable Gate Arrays : Implementation, Evaluation, and Future Projection.” In 2021 IEEE International Parallel and Distributed Processing Symposium (IPDPS). IEEE, 2021. https://doi.org/10.1109/ipdps49936.2021.00116.
LibreCat | DOI
 

2021 | Book Chapter | LibreCat-ID: 21587
Alhaddad, Samer, Jens Förstner, Stefan Groth, Daniel Grünewald, Yevgen Grynko, Frank Hannig, Tobias Kenter, et al. “HighPerMeshes – A Domain-Specific Language for Numerical Algorithms on Unstructured Grids.” In Euro-Par 2020: Parallel Processing Workshops. Cham, 2021. https://doi.org/10.1007/978-3-030-71593-9_15.
LibreCat | Files available | DOI
 

2021 | Journal Article | LibreCat-ID: 32243
Dabelow, Lennart, Stefano Bo, and Ralf Eichhorn. “How Irreversible Are Steady-State Trajectories of a Trapped Active Particle?” Journal of Statistical Mechanics: Theory and Experiment 2021, no. 3 (2021). https://doi.org/10.1088/1742-5468/abe6fd.
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2021 | Preprint | LibreCat-ID: 32245
Farheen, Henna, Till Leuteritz, Stefan Linden, Viktor Myroshnychenko, and Jens Förstner. “Optimization of Optical Waveguide Antennas for Directive Emission of  Light.” ArXiv:2106.02468, 2021.
LibreCat | arXiv
 

2021 | Journal Article | LibreCat-ID: 46123
Altenkort, Luis, Alexander M. Eller, O. Kaczmarek, Lukas Mazur, Guy D. Moore, and H.-T. Shu. “Sphaleron Rate from Euclidean Lattice Correlators: An Exploration.” Physical Review D 103, no. 11 (2021). https://doi.org/10.1103/physrevd.103.114513.
LibreCat | DOI
 

2021 | Preprint | LibreCat-ID: 32236
Rose, H., O. V. Tikhonova, T. Meier, and P. Sharapova. “Steady States of $Λ$-Type Three-Level Systems Excited by Quantum  Light in Lossy Cavities.” ArXiv:2109.00842, 2021.
LibreCat | arXiv
 

2021 | Journal Article | LibreCat-ID: 24788 | OA
Alhaddad, Samer, Jens Förstner, Stefan Groth, Daniel Grünewald, Yevgen Grynko, Frank Hannig, Tobias Kenter, et al. “The HighPerMeshes Framework for Numerical Algorithms on Unstructured Grids.” Concurrency and Computation: Practice and Experience, 2021, e6616. https://doi.org/10.1002/cpe.6616.
LibreCat | Files available | DOI
 

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